RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 MRPL9Q9BYD2 267 aaKnown RBP18.37■□□□□ 0.53
CCDC94-201ENST00000262962 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
CCDC94-201ENST00000262962 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
CCDC94-201ENST00000262962 RC3H2Q9HBD1 1191 aaKnown RBP18.37■□□□□ 0.53
CCDC94-201ENST00000262962 INPP5FQ9Y2H2 1132 aa18.37■□□□□ 0.53
CCDC94-201ENST00000262962 TBKBP1A7MCY6 615 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 KCNJ18B7U540 433 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 THP07101 528 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 DLATP10515 647 aaKnown RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 ZNF18P17022 549 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 AFF1P51825 1210 aaKnown RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 CLDN10P78369 228 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 GRIK3Q13003 919 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 KCNJ12Q14500 433 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 TMEM132DQ14C87 1099 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 TCP11X2Q5H9J9 407 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 FAM117BQ6P1L5 589 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 TMCO2Q7Z6W1 182 aaPredicted RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 HERC6Q8IVU3 1022 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 EFCAB13Q8IY85 973 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 PPP1R10Q96QC0 940 aaKnown RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 SLC38A7Q9NVC3 462 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 MIOSQ9NXC5 875 aa18.36■□□□□ 0.53
CCDC94-201ENST00000262962 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.36■□□□□ 0.53
CCDC94-201ENST00000262962 A0A1W2PPC1 479 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 LRRIQ3A6PVS8 624 aaPredicted RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 XPOTO43592 962 aaKnown RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 STX10O60499 249 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 NFICP08651 508 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 TNNI1P19237 187 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 GATMP50440 423 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 DLG4P78352 724 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 ZBTB6Q15916 424 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 GAS2L3Q86XJ1 694 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 CREBRFQ8IUR6 639 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 ANKRD20A12PQ8NF67 263 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 YME1L1Q96TA2 773 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 ZBED2Q9BTP6 218 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
CCDC94-201ENST00000262962 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
CCDC94-201ENST00000262962 POMCP01189 267 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 TRIM49P0CI25 452 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 TRIM49CP0CI26 452 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 AP3M2P53677 418 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 DUOXA2Q1HG44 320 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 DCAF17Q5H9S7 520 aaPredicted RBP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 TCERG1LQ5VWI1 586 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 CMTR2Q8IYT2 770 aaKnown RBP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 ANKRD36BP1Q96IX9 119 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 POP1Q99575 1024 aaKnown RBP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 RAD9AQ99638 391 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 TBC1D13Q9NVG8 400 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 INSL6Q9Y581 213 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 RANBP2P49792 3224 aaKnown RBP18.34■□□□□ 0.53
CCDC94-201ENST00000262962 KIAA1671Q9BY89 1806 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 PTPRJQ12913 1337 aa18.34■□□□□ 0.53
CCDC94-201ENST00000262962 TMEM191BP0C7N4 346 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 CYP3A5P20815 502 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 GTF2H1P32780 548 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 TFAMQ00059 246 aaKnown RBP18.33■□□□□ 0.53
CCDC94-201ENST00000262962 RNASELQ05823 741 aaKnown RBP18.33■□□□□ 0.53
CCDC94-201ENST00000262962 NAB2Q15742 525 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 MAN2A1Q16706 1144 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 LMBRD2Q68DH5 695 aaPredicted RBP18.33■□□□□ 0.53
CCDC94-201ENST00000262962 TUBGCP2Q9BSJ2 902 aa18.33■□□□□ 0.53
CCDC94-201ENST00000262962 NLRC5Q86WI3 1866 aa18.33■□□□□ 0.52
CCDC94-201ENST00000262962 TLL1O43897 1013 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 TNNC2P02585 160 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 BTG3Q14201 252 aaPredicted RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 KRT31Q15323 416 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 OR5B17Q8NGF7 314 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 ZNF516Q92618 1163 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 C18orf25Q96B23 403 aaPredicted RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 FAM193BQ96PV7 902 aaPredicted RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 MTMR12Q9C0I1 747 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 RBSNQ9H1K0 784 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 LIMA1Q9UHB6 759 aaKnown RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 LRRC10BA6NIK2 292 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 TPM2P07951 284 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 ATP1A3P13637 1013 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 PRKCSHP14314 528 aaPredicted RBP18.32■□□□□ 0.52
CCDC94-201ENST00000262962 PPP3CAQ08209 521 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 DSC1Q08554 894 aa18.32■□□□□ 0.52
CCDC94-201ENST00000262962 KCNH2Q12809 1159 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms