RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 TMEM47Q9BQJ4 181 aa17.18■□□□□ 0.34
NEO1-201ENST00000261908 TMEM245Q9H330 911 aa17.18■□□□□ 0.34
NEO1-201ENST00000261908 DDX56Q9NY93 547 aaKnown RBP17.18■□□□□ 0.34
NEO1-201ENST00000261908 IGF2BP3O00425 579 aaKnown RBP eCLIP17.17■□□□□ 0.343e-6■■■□□ 18.6
NEO1-201ENST00000261908 ACTR2P61160 394 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 AGPAT1Q99943 283 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SH3GL2Q99962 352 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 TRIM45Q9H8W5 580 aaPredicted RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 ZNF556Q9HAH1 456 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 ZNF263O14978 683 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 ZBTB5O15062 677 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 DLGAP3O95886 979 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 LSP1P33241 339 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 MAPRE2Q15555 327 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SUPT20HL1Q3ZLR7 823 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SYNE4Q8N205 404 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 ATMINO43313 823 aaPredicted RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 SULT1E1P49888 294 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SMTNL2Q2TAL5 461 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 EIF2AK1Q9BQI3 630 aaKnown RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 TMEM117Q9H0C3 514 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 DHX34Q14147 1143 aaKnown RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 TTC23LQ6PF05 361 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 LXNQ9BS40 222 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 B2RBV5 119 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 CYP2E1P05181 493 aaPredicted RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 DNAJC9Q8WXX5 260 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SNX12Q9UMY4 172 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 FAM32AQ9Y421 112 aaKnown RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 ARHGEF37A1IGU5 675 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 C5orf58C9J3I9 102 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 RGS5O15539 181 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
NEO1-201ENST00000261908 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 TRIM54Q9BYV2 358 aa17.17■□□□□ 0.34
NEO1-201ENST00000261908 SUPT3HB4E1H0 165 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 JAK3P52333 1124 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 HORMAD1Q86X24 394 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 SLC16A1P53985 500 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 ZNF235Q14590 738 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 CDKL3Q8IVW4 592 aaPredicted RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 GOLPH3Q9H4A6 298 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 TPST1O60507 370 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
NEO1-201ENST00000261908 PRDX5P30044 214 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 C3orf62Q6ZUJ4 267 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 RFFLQ8WZ73 363 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 UTYO14607 1347 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 PITPNM2Q9BZ72 1349 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 M0R3G1 203 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 ASMTLO95671 621 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 USP10Q14694 798 aaKnown RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 KIRREL3Q8IZU9 778 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 MTERF3Q96E29 417 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 MCEEQ96PE7 176 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 PRPF18Q99633 342 aaKnown RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 TBXAS1P24557 533 aaPredicted RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 CSE1LP55060 971 aaKnown RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 OTUB1Q96FW1 271 aaPredicted RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 CAPN10Q9HC96 672 aa17.16■□□□□ 0.34
NEO1-201ENST00000261908 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 NFKBIL1Q9UBC1 381 aaPredicted RBP17.16■□□□□ 0.34
NEO1-201ENST00000261908 STAT4Q14765 748 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 MIER2Q8N344 545 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 SLC25A41Q8N5S1 370 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 RBM15Q96T37 977 aaKnown RBP eCLIP17.15■□□□□ 0.34
NEO1-201ENST00000261908 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 PNMA8BQ9ULN7 279 aaPredicted RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 NEU2Q9Y3R4 380 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 COPG1Q9Y678 874 aaKnown RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 GRIK1P39086 918 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 PHKA2P46019 1235 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 CARD9Q9H257 536 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
NEO1-201ENST00000261908 TRPC7Q9HCX4 862 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 GRIN1Q05586 938 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 SYNDIG1Q9H7V2 258 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 KRT87PA6NCN2 255 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 RTN2O75298 545 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 GSNP06396 782 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 ZCCHC18P0CG32 403 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 MYBL1P10243 752 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 SOAT1P35610 550 aa17.15■□□□□ 0.34
NEO1-201ENST00000261908 MAPRE1Q15691 268 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms