RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HOMER3Q9NSC5 361 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 NOP53Q9NZM5 478 aaKnown RBP13.86□□□□□ -0.19
SNX1-201ENST00000261889 ANAPC5Q9UJX4 755 aa13.86□□□□□ -0.19
SNX1-201ENST00000261889 SBF1O95248 1867 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 BHMG1C9JSJ3 638 aaPredicted RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 ASAP2O43150 1006 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 FGFR1P11362 822 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 PCK1P35558 622 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 MXI1P50539 228 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 ZNF131P52739 623 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 WDR4P57081 412 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 TGFB2P61812 414 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 LMO3Q8TAP4 145 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 RBM17Q96I25 401 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 NPHS2Q9NP85 383 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 MYH11P35749 1972 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 NCANO14594 1321 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 RARGP13631 454 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 FMO1Q01740 532 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 TAOK1Q7L7X3 1001 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 SAYSD1Q9NPB0 183 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 KLHL14Q9P2G3 628 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 COL4A5P29400 1685 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 AP1G2O75843 785 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 MAPK4P31152 587 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 DHX34Q14147 1143 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 TMEM63BQ5T3F8 832 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 CAPRIN2Q6IMN6 1127 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 ZC3H3Q8IXZ2 948 aaKnown RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 NAP1L3Q99457 506 aaPredicted RBP13.85□□□□□ -0.19
SNX1-201ENST00000261889 HSD17B14Q9BPX1 270 aa13.85□□□□□ -0.19
SNX1-201ENST00000261889 NAV1Q8NEY1 1877 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 A0A0A6YYK5 440 aaPredicted RBP13.84□□□□□ -0.19
SNX1-201ENST00000261889 CES2O00748 559 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 ATF2P15336 505 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 ART4Q93070 314 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 OSBPL1AQ9BXW6 950 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 LAMA3Q16787 3333 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 RTN2O75298 545 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 MAP3K6O95382 1288 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 BCRP11274 1271 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
SNX1-201ENST00000261889 RPA3P35244 121 aaPredicted RBP13.84□□□□□ -0.19
SNX1-201ENST00000261889 BIRC2Q13490 618 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 P3H1Q32P28 736 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 C1orf131Q8NDD1 294 aaKnown RBP13.84□□□□□ -0.19
SNX1-201ENST00000261889 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
SNX1-201ENST00000261889 NKIRAS1Q9NYS0 192 aa13.84□□□□□ -0.19
SNX1-201ENST00000261889 A0A0G2JND7 137 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 CRKP46108 304 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 RWDD2BP57060 319 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 TAS2R40P59535 323 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 RASA3Q14644 834 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 UCMAQ8WVF2 138 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 MKL1Q969V6 931 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 ZNF668Q96K58 619 aaPredicted RBP13.83□□□□□ -0.19
SNX1-201ENST00000261889 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.19
SNX1-201ENST00000261889 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.19
SNX1-201ENST00000261889 SCN9AQ15858 1988 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 IGLV3-22A0A075B6J6 115 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 IL1R1P14778 569 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 LACTBP83111 547 aaPredicted RBP13.83□□□□□ -0.2
SNX1-201ENST00000261889 BNIP1Q12981 228 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 UGCGQ16739 394 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 ABCB5Q2M3G0 1257 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 IZUMO3Q5VZ72 239 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 APBB1IPQ7Z5R6 666 aaPredicted RBP13.83□□□□□ -0.2
SNX1-201ENST00000261889 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 GAKO14976 1311 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 EXOC1LA0A1B0GW35 172 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 ZBED4O75132 1171 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 ZBTB7AO95365 584 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 GHRP10912 638 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
SNX1-201ENST00000261889 CYP11B1P15538 503 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 TAC1P20366 129 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 CA4P22748 312 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 CTNNA2P26232 953 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 ATP11AP98196 1134 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 ITIH4Q14624 930 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 TEKT1Q969V4 418 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
SNX1-201ENST00000261889 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms