RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 LZICQ8WZA0 190 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 LPAR1Q92633 364 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 KLHL29Q96CT2 875 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 E2F6O75461 281 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 NFIAQ12857 509 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CASP8Q14790 479 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 LAMC1P11047 1609 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 GOLGA8QA0A0J9YX86 632 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 GOLGA8OA6NCC3 632 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 TMEM247A6NEH6 219 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 GOLGA8NF8WBI6 632 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 ARL4DP49703 201 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 GABPB1Q06547 395 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 TAGAPQ8N103 731 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 DPF2Q92785 391 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CYP26B1Q9NR63 512 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 RBP5P82980 135 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 DRC3Q9H069 523 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 SMARCAL1Q9NZC9 954 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 LSM7Q9UK45 103 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 H0Y3Z8 333 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPG11-201ENST00000261866 MAP3K6O95382 1288 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 ITGB3P05106 788 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 PDGFRAP16234 1089 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CPT1AP50416 773 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 C2CD6Q53TS8 623 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 RNF180Q86T96 592 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 PITPNM3Q9BZ71 974 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPG11-201ENST00000261866 MMEP08473 750 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 PMS2P54278 862 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 KRT17Q04695 432 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
SPG11-201ENST00000261866 OSBPL9Q96SU4 736 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 MAP10Q9P2G4 905 aa12.84□□□□□ -0.35
SPG11-201ENST00000261866 MYMKA6NI61 221 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 PFDN1O60925 122 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 ATP1A1P05023 1023 aaKnown RBP12.83□□□□□ -0.35
SPG11-201ENST00000261866 RAP1GAPP47736 663 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 SOX10P56693 466 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 RAD51Q06609 339 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.35
SPG11-201ENST00000261866 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 NAGPAQ9UK23 515 aa12.83□□□□□ -0.35
SPG11-201ENST00000261866 KCNA2P16389 499 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 BEND6Q5SZJ8 279 aaPredicted RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 TEKT4Q8WW24 435 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 SENP1Q9P0U3 644 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 TRIM10Q9UDY6 481 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 GGT7Q9UJ14 662 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 IZUMO3Q5VZ72 239 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 METTL16Q86W50 562 aaKnown RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 RBBP8NLQ8NC74 664 aaPredicted RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 ATPAF2Q8N5M1 289 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 C18orf8Q96DM3 657 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 ENTPD3O75355 529 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 DGAT1O75907 488 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 ALDH1A3P47895 512 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 MAGOHP61326 146 aaKnown RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 APBA1Q02410 837 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 PDCLQ13371 301 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 SLC26A7Q8TE54 656 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 SENP7Q9BQF6 1050 aa12.83□□□□□ -0.36
SPG11-201ENST00000261866 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
SPG11-201ENST00000261866 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 LRG1P02750 347 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 EEF1DP29692 281 aaKnown RBP12.82□□□□□ -0.36
SPG11-201ENST00000261866 CLCN3P51790 818 aa12.82□□□□□ -0.36
SPG11-201ENST00000261866 GTF2A2P52657 109 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms