RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CORO1CQ9ULV4 474 aaPredicted RBP16.95■□□□□ 0.3
LMNB1-201ENST00000261366 ATP8B3O60423 1300 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 EXOC1LA0A1B0GW35 172 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 F5H6K3 240 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 SMIM24O75264 130 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 GGPS1O95749 300 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 IL1R1P14778 569 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 RBM5P52756 815 aaKnown RBP eCLIP16.94■□□□□ 0.3
LMNB1-201ENST00000261366 MXRA7P84157 204 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 FMO1Q01740 532 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 OVGP1Q12889 678 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 ANO7Q6IWH7 933 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 ZNF365Q70YC5 407 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 OTOP1Q7RTM1 612 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 LRRC19Q9H756 370 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 RNPEPL1Q9HAU8 725 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 PIDD1Q9HB75 910 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 TOPORSQ9NS56 1045 aaPredicted RBP16.94■□□□□ 0.3
LMNB1-201ENST00000261366 WHRNQ9P202 907 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
LMNB1-201ENST00000261366 GAS8O95995 478 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 CCNB1P14635 433 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 ITIH2P19823 946 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 IVDP26440 423 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 MXI1P50539 228 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 IZUMO3Q5VZ72 239 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 KAZNQ674X7 775 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 CDC42EP5Q6NZY7 148 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 RFX8Q6ZV50 586 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 CPA5Q8WXQ8 436 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
LMNB1-201ENST00000261366 PPP1R12CQ9BZL4 782 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 DMAC2Q9NW81 257 aa16.94■□□□□ 0.3
LMNB1-201ENST00000261366 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 FAM47DPA6NHR8 397 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 CDH16O75309 829 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 ZSCAN5DPP0CG00 497 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 RALAP11233 206 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 ICA1Q05084 483 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 FASTKD3Q14CZ7 662 aaKnown RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 RHBDF2Q6PJF5 856 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 SAYSD1Q9NPB0 183 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 TBX3O15119 743 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 CALB2P22676 271 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 CA4P22748 312 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 PKN2Q16513 984 aaKnown RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 RNF43Q68DV7 783 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
LMNB1-201ENST00000261366 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 NPHS2Q9NP85 383 aa16.93■□□□□ 0.3
LMNB1-201ENST00000261366 GOLGA8SH3BPF8 625 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 GOLGA8MH3BSY2 632 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 TPBGLP0DKB5 382 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 CD58P19256 250 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 RPA3P35244 121 aaPredicted RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 PTDSS1P48651 473 aaKnown RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 MUM1Q2TAK8 710 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 ZNF568Q3ZCX4 644 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 TAF1BQ53T94 588 aaPredicted RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 RFWD3Q6PCD5 774 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 STXBP4Q6ZWJ1 553 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 RBM15Q96T37 977 aaKnown RBP eCLIP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 LXNQ9BS40 222 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 KIF13BQ9NQT8 1826 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 BANF1O75531 89 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 LUC7L3O95232 432 aaKnown RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 CYP11B1P15538 503 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 FAM182AQ5T1J6 154 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 GLIS1Q8NBF1 620 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 STK32AQ8WU08 396 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 HAUS1Q96CS2 278 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 ZCWPW1Q9H0M4 648 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 DENND2DQ9H6A0 471 aaPredicted RBP16.92■□□□□ 0.3
LMNB1-201ENST00000261366 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 UBN1Q9NPG3 1134 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 LY75O60449 1722 aa16.92■□□□□ 0.3
LMNB1-201ENST00000261366 DDTLA6NHG4 134 aaPredicted RBP16.91■□□□□ 0.3
LMNB1-201ENST00000261366 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 CYP3A4P08684 503 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 ARP10275 920 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 ETS1P14921 441 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 P3H1Q32P28 736 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
LMNB1-201ENST00000261366 PPP1R21Q6ZMI0 780 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms