RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 TNFAIP3P21580 790 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 NOP2P46087 812 aaKnown RBP19.01■□□□□ 0.63
SSB-201ENST00000260956 MRPS25P82663 173 aaKnown RBP19.01■□□□□ 0.63
SSB-201ENST00000260956 TNFAIP2Q03169 654 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 C8orf74Q6P047 294 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 SV2AQ7L0J3 742 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 SYCE1Q8N0S2 351 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 DDX1Q92499 740 aaKnown RBP19.01■□□□□ 0.63
SSB-201ENST00000260956 ZNF516Q92618 1163 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 CALR3Q96L12 384 aaKnown RBP19.01■□□□□ 0.63
SSB-201ENST00000260956 XPNPEP3Q9NQH7 507 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 HNRNPDLO14979 420 aaKnown RBP19■□□□□ 0.63
SSB-201ENST00000260956 MSCO60682 206 aa19■□□□□ 0.63
SSB-201ENST00000260956 DUSP11O75319 330 aaKnown RBP19■□□□□ 0.63
SSB-201ENST00000260956 GLI1P08151 1106 aa19■□□□□ 0.63
SSB-201ENST00000260956 RARBP10826 455 aa19■□□□□ 0.63
SSB-201ENST00000260956 NAMPTP43490 491 aa19■□□□□ 0.63
SSB-201ENST00000260956 SLC7A5Q01650 507 aa19■□□□□ 0.63
SSB-201ENST00000260956 FMO1Q01740 532 aa19■□□□□ 0.63
SSB-201ENST00000260956 PSMD6Q15008 389 aa19■□□□□ 0.63
SSB-201ENST00000260956 LY6KQ17RY6 165 aa19■□□□□ 0.63
SSB-201ENST00000260956 DCAF12L1Q5VU92 463 aa19■□□□□ 0.63
SSB-201ENST00000260956 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
SSB-201ENST00000260956 CRELD2Q6UXH1 353 aaPredicted RBP19■□□□□ 0.63
SSB-201ENST00000260956 FBXL13Q8NEE6 735 aa19■□□□□ 0.63
SSB-201ENST00000260956 LMBR1Q8WVP7 490 aa19■□□□□ 0.63
SSB-201ENST00000260956 PSPC1Q8WXF1 523 aaKnown RBP19■□□□□ 0.63
SSB-201ENST00000260956 POMGNT1Q8WZA1 660 aa19■□□□□ 0.63
SSB-201ENST00000260956 CAVIN3Q969G5 261 aa19■□□□□ 0.63
SSB-201ENST00000260956 CCDC127Q96BQ5 260 aa19■□□□□ 0.63
SSB-201ENST00000260956 IFT74Q96LB3 600 aa19■□□□□ 0.63
SSB-201ENST00000260956 EXTL3O43909 919 aa19■□□□□ 0.63
SSB-201ENST00000260956 MATR3P43243 847 aaKnown RBP eCLIP19■□□□□ 0.63
SSB-201ENST00000260956 RGS19P49795 217 aa19■□□□□ 0.63
SSB-201ENST00000260956 DNA2P51530 1060 aa19■□□□□ 0.63
SSB-201ENST00000260956 CCDC70Q6NSX1 233 aa19■□□□□ 0.63
SSB-201ENST00000260956 PEX26Q7Z412 305 aa19■□□□□ 0.63
SSB-201ENST00000260956 RPUSD2Q8IZ73 545 aaKnown RBP19■□□□□ 0.63
SSB-201ENST00000260956 CTNNBL1Q8WYA6 563 aaPredicted RBP19■□□□□ 0.63
SSB-201ENST00000260956 TMEM143Q96AN5 459 aa19■□□□□ 0.63
SSB-201ENST00000260956 PAWRQ96IZ0 340 aaKnown RBP19■□□□□ 0.63
SSB-201ENST00000260956 RAB20Q9NX57 234 aa19■□□□□ 0.63
SSB-201ENST00000260956 PTPRJQ12913 1337 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 AGPSO00116 658 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 ZC3H11AO75152 810 aaKnown RBP eCLIP18.99■□□□□ 0.63
SSB-201ENST00000260956 SYF2O95926 243 aaKnown RBP18.99■□□□□ 0.63
SSB-201ENST00000260956 MYCNP04198 464 aaPredicted RBP18.99■□□□□ 0.63
SSB-201ENST00000260956 TGFB3P10600 412 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 GZMAP12544 262 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 RFC5P40937 340 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 POLGP54098 1239 aaPredicted RBP18.99■□□□□ 0.63
SSB-201ENST00000260956 DUSP28Q4G0W2 176 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 CCSAPQ6IQ19 270 aaPredicted RBP18.99■□□□□ 0.63
SSB-201ENST00000260956 C11orf63Q6NUN7 778 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 TAF4BQ92750 862 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 FAM84AQ96KN4 292 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 NOC2LQ9Y3T9 749 aaKnown RBP18.99■□□□□ 0.63
SSB-201ENST00000260956 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
SSB-201ENST00000260956 TMCO5BA8MYB1 307 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 KIAA0391O15091 583 aaKnown RBP18.98■□□□□ 0.63
SSB-201ENST00000260956 POLR3GO15318 223 aaPredicted RBP18.98■□□□□ 0.63
SSB-201ENST00000260956 DYNC1LI2O43237 492 aaPredicted RBP18.98■□□□□ 0.63
SSB-201ENST00000260956 LGR5O75473 907 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 TXNP10599 105 aaKnown RBP18.98■□□□□ 0.63
SSB-201ENST00000260956 GCNT1Q02742 428 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 EMBQ6PCB8 327 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 METTL7BQ6UX53 244 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 SLC47A2Q86VL8 602 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.634e-8■■■■■ 28.7
SSB-201ENST00000260956 KIAA1586Q9HCI6 787 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 ACP6Q9NPH0 428 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 MED4Q9NPJ6 270 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 KCNG1Q9UIX4 513 aa18.98■□□□□ 0.63
SSB-201ENST00000260956 ZSCAN5CA6NGD5 496 aaPredicted RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 ZBTB42B2RXF5 422 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 PGRMC1O00264 195 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 CYP26A1O43174 497 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 RAD51CO43502 376 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 CLSTN1O94985 981 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 ABCB4P21439 1286 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 MFAP3P55082 362 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 NLRP11P59045 1033 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 BEX3Q00994 111 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 NNTQ13423 1086 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 CAPSQ13938 189 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 ZACNQ401N2 412 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 DAAM2Q86T65 1068 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 TLK2Q86UE8 772 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 KLHDC9Q8NEP7 349 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 FAM71BQ8TC56 605 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 TATDN2Q93075 761 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 KRT12Q99456 494 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 MPHOSPH6Q99547 160 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 FAM213AQ9BRX8 229 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 UPF3AQ9H1J1 476 aaKnown RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 TMEM134Q9H6X4 195 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.97■□□□□ 0.63
SSB-201ENST00000260956 A0A0B4J269 797 aa18.97■□□□□ 0.63
SSB-201ENST00000260956 FAM189A1O60320 539 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms