RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 APOBEC3GQ9HC16 384 aaKnown RBP12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 BTBD7Q9P203 1132 aa12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 DIS3Q9Y2L1 958 aaKnown RBP12.13□□□□□ -0.47
SLC3A1-201ENST00000260649 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 TULP2O00295 520 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 EXTL3O43909 919 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CAND2O75155 1236 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 ERLIN2O94905 339 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PGK2P07205 417 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 TNFSF9P41273 254 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PTGIRP43119 386 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 RWDD2BP57060 319 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 XRRA1Q6P2D8 792 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 TMEM130Q8N3G9 435 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 LRRC71Q8N4P6 559 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MYH9P35579 1960 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 VNN1O95497 513 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 GJB1P08034 283 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 GARTP22102 1010 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MDH1P40925 334 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 NSFP46459 744 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 VGLL4Q14135 290 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 ZDHHC24Q6UX98 284 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 HVCN1Q96D96 273 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 HERPUD2Q9BSE4 406 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 GINM1Q9NU53 330 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 ADAMTS5Q9UNA0 930 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 COILP38432 576 aaPredicted RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 LIG3P49916 1009 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PMS2P54278 862 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 SLC29A2Q14542 456 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 SCARA5Q6ZMJ2 495 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PRUNE1Q86TP1 453 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MCOLN2Q8IZK6 566 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CD101Q93033 1021 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 MTUS1Q9ULD2 1270 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
SLC3A1-201ENST00000260649 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 THAP12O43422 761 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 CHRNA3P32297 505 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 HADHBP55084 474 aaKnown RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 SGO2Q562F6 1265 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 TRAPPC12Q8WVT3 735 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 PWWP2AQ96N64 755 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 GRHL1Q9NZI5 618 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 USP2O75604 605 aaPredicted RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 GGPS1O95749 300 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 OAZ1P54368 228 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 DHX34Q14147 1143 aaKnown RBP12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 PTGISQ16647 500 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 TMEM63BQ5T3F8 832 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 RUFY4Q6ZNE9 571 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 PCYT2Q99447 389 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 SELENOSQ9BQE4 189 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 ELP3Q9H9T3 547 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
SLC3A1-201ENST00000260649 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 NFASCO94856 1347 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 WDR81Q562E7 1941 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
SLC3A1-201ENST00000260649 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms