RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 RILPQ96NA2 401 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PIGSQ96S52 555 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PRPF18Q99633 342 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 GPR63Q9BZJ6 419 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 KLC2Q9H0B6 622 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SIK2Q9H0K1 926 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NCOA5Q9HCD5 579 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 KRCC1Q9NPI7 259 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 NYAP2Q9P242 653 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ZBTB12Q9Y330 459 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 FHOD1Q9Y613 1164 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ITIH6Q6UXX5 1313 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SYNRGQ9UMZ2 1314 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 LRRC53A6NM62 1247 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ORC4O43929 436 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 B3GAT3O94766 335 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 RTN3O95197 1032 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 PRKAR2AP13861 404 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 POLR2EP19388 210 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 CDC25CP30307 473 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 IL13P35225 146 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ADCY8P40145 1251 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 ABL2P42684 1182 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 RENBPP51606 427 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TAS2R50P59544 299 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 POLR2LP62875 67 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 RPP38P78345 283 aaKnown RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 TAP1Q03518 808 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TWF1Q12792 350 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SLC12A1Q13621 1099 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NAALADL2Q58DX5 795 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 SCARA5Q6ZMJ2 495 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAM83AQ86UY5 434 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 BBS7Q8IWZ6 715 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 EFHD1Q9BUP0 239 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CYP26B1Q9NR63 512 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 FAM217BQ9NTX9 383 aaPredicted RBP4.27□□□□□ -1.73
RNF38-201ENST00000259605 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NRBP1Q9UHY1 535 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 NAGPAQ9UK23 515 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 DNPEPQ9ULA0 475 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PCDHB5Q9Y5E4 795 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 TRPV2Q9Y5S1 764 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PTPN23Q9H3S7 1636 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 MAGI3Q5TCQ9 1506 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PTPRMP28827 1452 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 USP27XA6NNY8 438 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PEX12O00623 359 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 NFATC1O95644 943 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 THP07101 528 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 RPS6KB1P23443 525 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PSEN2P49810 448 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 CLCN6P51797 869 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 MKRN4PQ13434 485 aaPredicted RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 TRIM72Q6ZMU5 477 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PCGF5Q86SE9 256 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 COL23A1Q86Y22 540 aaPredicted RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 NRSN1Q8IZ57 195 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PDZD8Q8NEN9 1154 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 AFAP1L1Q8TED9 768 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 ARNTL2Q8WYA1 636 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 E2F7Q96AV8 911 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 MRPL48Q96GC5 212 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 LSM14BQ9BX40 385 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 FBXO44Q9H4M3 255 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 SARS2Q9NP81 518 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 SH3GLB2Q9NR46 395 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 TMEM260Q9NX78 707 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PKD2L2Q9NZM6 624 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 AFF4Q9UHB7 1163 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 CHMP2BQ9UQN3 213 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 ARHGAP31Q2M1Z3 1444 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 UBE4BO95155 1302 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 CCDC160A6NGH7 325 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 RRP8O43159 456 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 MTSS1O43312 755 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PFKFB2O60825 505 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 KRT1P04264 644 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PLA2G4BP0C869 781 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 ATF2P15336 505 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 ADORA2BP29275 332 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 BLKP51451 505 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 NRLP54845 237 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 NSUN2Q08J23 767 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNF38-201ENST00000259605 ILF2Q12905 390 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 NNTQ13423 1086 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 DCTN2Q13561 401 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 SNW1Q13573 536 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 UGT3A1Q6NUS8 523 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 PADI6Q6TGC4 694 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 RD3Q7Z3Z2 195 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 SMG7Q92540 1137 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 GPRASP2Q96D09 838 aa4.26□□□□□ -1.73
RNF38-201ENST00000259605 TLR8Q9NR97 1041 aaKnown RBP4.26□□□□□ -1.73
RNF38-201ENST00000259605 SPG21Q9NZD8 308 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms