RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 TAF6LQ9Y6J9 622 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ITIH6Q6UXX5 1313 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PVALEFA0A1B0GWK0 134 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 TMEM150BA6NC51 233 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 KRT31Q15323 416 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 KCNA10Q16322 511 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MAGOHBQ96A72 148 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 NT5C1AQ9BXI3 368 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MRPL17Q9NRX2 175 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 KLHL11Q9NVR0 708 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 TBX20Q9UMR3 447 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 SAR1BQ9Y6B6 198 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 BCL9LQ86UU0 1499 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 E5RI56 91 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 XYLBO75191 536 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 EGFRP00533 1210 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 FAM200BP0CF97 657 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 FOXD4Q12950 439 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 SHROOM1Q2M3G4 852 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 BZW1Q7L1Q6 419 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CHSY1Q86X52 802 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RDM1Q8NG50 284 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 P3H4Q92791 437 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 TMEM60Q9H2L4 133 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RAB23Q9ULC3 237 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ENDOD1O94919 500 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ESRRBO95718 433 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 SYF2O95926 243 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MAP3K7CLP57077 242 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MPZL3Q6UWV2 235 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CPLX4Q7Z7G2 160 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ITIH5Q86UX2 942 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PROM2Q8N271 834 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF513Q8N8E2 541 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RNF25Q96BH1 459 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PABPC5Q96DU9 382 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CARD6Q9BX69 1037 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 C11orf49Q9H6J7 331 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PDGFCQ9NRA1 345 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PASKQ96RG2 1323 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CA12O43570 354 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 AP1G2O75843 785 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RPLP2P05387 115 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 SPATA31D3P0C874 917 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PNPLA4P41247 253 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RAB27AP51159 221 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CASP7P55210 303 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 FSTL1Q12841 308 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 ARHGEF7Q14155 803 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 DCAF6Q58WW2 860 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MDH1BQ5I0G3 518 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 SPATA31D4Q6ZUB0 917 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 DDI1Q8WTU0 396 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 RILPQ96NA2 401 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MRPL9Q9BYD2 267 aaKnown RBP6.75□□□□□ -1.33
BRIP1-201ENST00000259008 CIPCQ9C0C6 399 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 MTMR12Q9C0I1 747 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 PCDHB8Q9UN66 801 aa6.75□□□□□ -1.33
BRIP1-201ENST00000259008 H3BRJ5 948 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 GAS2O43903 313 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 FBXW4P57775 412 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 YWHAHQ04917 246 aaPredicted RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TWF1Q12792 350 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PLD1Q13393 1074 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CRY2Q49AN0 593 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CELF3Q5SZQ8 465 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF697Q5TEC3 545 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 THEMIS2Q5TEJ8 643 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PPP4R4Q6NUP7 873 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ADAMTS1Q9UHI8 967 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 FAM50BQ9Y247 325 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PCDHA13Q9Y5I0 950 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 UBA6A0AVT1 1052 aaPredicted RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 CCL5P13501 91 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 MRPS6P82932 125 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ITGA7Q13683 1181 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ERCC6LQ2NKX8 1250 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SYCP2LQ5T4T6 812 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 TAF2Q6P1X5 1199 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF579Q8NAF0 562 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SLC30A5Q8TAD4 765 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ATP8B4Q8TF62 1192 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 LPPQ93052 612 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF558Q96NG5 402 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 MED15Q96RN5 788 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 NUDCD1Q96RS6 583 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 RSAD1Q9HA92 442 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 DDX41Q9UJV9 622 aaKnown RBP6.74□□□□□ -1.33
BRIP1-201ENST00000259008 USP20Q9Y2K6 914 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SPDYE5A6NIY4 337 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SOWAHDA6NJG2 315 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 PAMP19021 973 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 SREBF1P36956 1147 aa6.74□□□□□ -1.33
BRIP1-201ENST00000259008 LMNB2Q03252 620 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms