RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 TCHPQ9BT92 498 aa20.54■□□□□ 0.88
PAX3-201ENST00000258387 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
PAX3-201ENST00000258387 TARS2Q9BW92 718 aaKnown RBP20.54■□□□□ 0.88
PAX3-201ENST00000258387 HCFC1R1Q9NWW0 138 aa20.54■□□□□ 0.88
PAX3-201ENST00000258387 CDY1Q9Y6F8 540 aa20.54■□□□□ 0.88
PAX3-201ENST00000258387 ZFP37Q9Y6Q3 630 aaPredicted RBP20.54■□□□□ 0.88
PAX3-201ENST00000258387 DMDP11532 3685 aa20.54■□□□□ 0.88
PAX3-201ENST00000258387 GRM5P41594 1212 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 BRCC3P46736 316 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 GPC5P78333 572 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 DMP1Q13316 513 aaPredicted RBP20.53■□□□□ 0.88
PAX3-201ENST00000258387 ZNF568Q3ZCX4 644 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 DTHD1Q6ZMT9 781 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 DAW1Q8N136 415 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 UROC1Q96N76 676 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 RUSC1Q9BVN2 902 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
PAX3-201ENST00000258387 CDT1Q9H211 546 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 KMT5AQ9NQR1 393 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 ARHGEF3Q9NR81 526 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 MTRRQ9UBK8 725 aa20.53■□□□□ 0.88
PAX3-201ENST00000258387 TMEM189-UBE2V1I3L0A0 370 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 TRAPPC3O43617 180 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 HARSP12081 509 aaKnown RBP20.52■□□□□ 0.88
PAX3-201ENST00000258387 SOX4Q06945 474 aaPredicted RBP20.52■□□□□ 0.88
PAX3-201ENST00000258387 UVSSAQ2YD98 709 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 MCTP1Q6DN14 999 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 RINT1Q6NUQ1 792 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 C3orf58Q8NDZ4 430 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 TMEM134Q9H6X4 195 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 PTPRHQ9HD43 1115 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 SLC2A4RGQ9NR83 387 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 TOPORSQ9NS56 1045 aaPredicted RBP20.52■□□□□ 0.88
PAX3-201ENST00000258387 DNMT3BQ9UBC3 853 aaKnown RBP20.52■□□□□ 0.88
PAX3-201ENST00000258387 SIT1Q9Y3P8 196 aa20.52■□□□□ 0.88
PAX3-201ENST00000258387 SLC16A4O15374 487 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 HOXA9P31269 272 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 ARPP19P56211 112 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 RAD51AP2Q09MP3 1159 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 SNW1Q13573 536 aaKnown RBP20.51■□□□□ 0.87
PAX3-201ENST00000258387 ALKAL1Q6UXT8 129 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 ANKS3Q6ZW76 656 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 TAS1R3Q7RTX0 852 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 KCNK18Q7Z418 384 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 ING5Q8WYH8 240 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 DDX27Q96GQ7 796 aaKnown RBP20.51■□□□□ 0.87
PAX3-201ENST00000258387 DRC1Q96MC2 740 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 ZMAT2Q96NC0 199 aaKnown RBP20.51■□□□□ 0.87
PAX3-201ENST00000258387 ACAP3Q96P50 834 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 BACE2Q9Y5Z0 518 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 VPS13AQ96RL7 3174 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 PHLPP2Q6ZVD8 1323 aa20.51■□□□□ 0.87
PAX3-201ENST00000258387 PODXLO00592 558 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 PABPC1LQ4VXU2 614 aaKnown RBP20.5■□□□□ 0.87
PAX3-201ENST00000258387 PHLDB3Q6NSJ2 640 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 C1orf186Q6ZWK4 172 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 ADSSL1Q8N142 457 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 ZBTB45Q96K62 511 aaPredicted RBP20.5■□□□□ 0.87
PAX3-201ENST00000258387 PLIN2Q99541 437 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 KXD1Q9BQD3 176 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 MMTAG2Q9BU76 263 aaKnown RBP20.5■□□□□ 0.87
PAX3-201ENST00000258387 FOXQ1Q9C009 403 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 SLC38A7Q9NVC3 462 aa20.5■□□□□ 0.87
PAX3-201ENST00000258387 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
PAX3-201ENST00000258387 MTCL1Q9Y4B5 1905 aaKnown RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 LAD1O00515 517 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 MCF2P10911 925 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 MAPK7Q13164 816 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 XKR4Q5GH76 650 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 VARS2Q5ST30 1063 aaKnown RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 MTSS1LQ765P7 747 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 C18orf25Q96B23 403 aaPredicted RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 ARHGAP28Q9P2N2 729 aa20.49■□□□□ 0.87
PAX3-201ENST00000258387 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 MRPS23Q9Y3D9 190 aaKnown RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 RIF1Q5UIP0 2472 aaKnown RBP20.49■□□□□ 0.87
PAX3-201ENST00000258387 LRRN2O75325 713 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 ELF1P32519 619 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 PRPHP41219 470 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 STRN3Q13033 797 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 SEZ6Q53EL9 994 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 SHDQ96IW2 340 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 SNX27Q96L92 541 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 NUB1Q9Y5A7 615 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 R4GN57 208 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 DOCK8Q8NF50 2099 aa20.48■□□□□ 0.87
PAX3-201ENST00000258387 PRRG1O14668 218 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 KCNE1P15382 129 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 STARD6P59095 220 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 ROR1Q01973 937 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 SLC44A4Q53GD3 710 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 MPZL3Q6UWV2 235 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 NPAS3Q8IXF0 933 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 ZNF461Q8TAF7 563 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 C17orf75Q9HAS0 396 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
PAX3-201ENST00000258387 KCNH3Q9ULD8 1083 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms