RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ZNF335Q9H4Z2 1342 aaPredicted RBP12.24□□□□□ -0.45
TROAP-201ENST00000257909 PDLIM1O00151 329 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 EXOC3O60645 756 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 FAM13AO94988 1023 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 TJP3O95049 919 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 BTDP43251 543 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 CETN1Q12798 172 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 RCN1Q15293 331 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 LRRC74BQ6ZQY2 392 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 STXBP4Q6ZWJ1 553 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 NLRP9Q7RTR0 991 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
TROAP-201ENST00000257909 TDRPQ86YL5 185 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 ETNPPLQ8TBG4 499 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
TROAP-201ENST00000257909 CFAP57Q96MR6 1250 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 GBP5Q96PP8 586 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 SMC6Q96SB8 1091 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 BTBD10Q9BSF8 475 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 PPP1R12CQ9BZL4 782 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 UBE2TQ9NPD8 197 aaPredicted RBP12.24□□□□□ -0.45
TROAP-201ENST00000257909 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
TROAP-201ENST00000257909 IRS2Q9Y4H2 1338 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 SPAG7O75391 227 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 CYP1A2P05177 515 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 TRIM49P0CI25 452 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 TRIM49CP0CI26 452 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 AP1B1Q10567 949 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 BFSP1Q12934 665 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 TBC1D25Q3MII6 688 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
TROAP-201ENST00000257909 CCDC89Q8N998 374 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 LMO3Q8TAP4 145 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 GATA6Q92908 595 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 RBM41Q96IZ5 413 aaKnown RBP12.23□□□□□ -0.45
TROAP-201ENST00000257909 CCDC28BQ9BUN5 200 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 CYLDQ9NQC7 956 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 DMAC2Q9NW81 257 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
TROAP-201ENST00000257909 GTF3C4Q9UKN8 822 aa12.23□□□□□ -0.45
TROAP-201ENST00000257909 EXOC1LA0A1B0GW35 172 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 Q4G0T1 1027 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 LRRC23Q53EV4 343 aaPredicted RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 PTPRN2Q92932 1015 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 NR1H4Q96RI1 486 aaPredicted RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 CADM1Q9BY67 442 aaKnown RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 TRABDQ9H4I3 376 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 CHST7Q9NS84 486 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 ZNF212Q9UDV6 495 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 COL24A1Q17RW2 1714 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 CAPN9O14815 690 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 MAP3K7O43318 606 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 TOM1O60784 492 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.45
TROAP-201ENST00000257909 NMT1P30419 496 aaKnown RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 PSMC4P43686 418 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 CTC1Q2NKJ3 1217 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 PRR16Q569H4 304 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 RINT1Q6NUQ1 792 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 RFWD3Q6PCD5 774 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 STMN2Q93045 179 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 C9orf72Q96LT7 481 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 MIPEPQ99797 713 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
TROAP-201ENST00000257909 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 VCX3BQ9H321 246 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 PCMTD2Q9NV79 361 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
TROAP-201ENST00000257909 NRAPQ86VF7 1730 aa12.22□□□□□ -0.45
TROAP-201ENST00000257909 P4HA2O15460 535 aa12.21□□□□□ -0.45
TROAP-201ENST00000257909 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
TROAP-201ENST00000257909 PSMG1O95456 288 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms