RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 PADI6Q6TGC4 694 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 TRMT1LQ7Z2T5 733 aaKnown RBP14.29□□□□□ -0.12
H3F3B-201ENST00000254810 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 MAML1Q92585 1016 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
H3F3B-201ENST00000254810 LINGO3P0C6S8 592 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ATF2P15336 505 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 CCNG1P51959 295 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ATP11AP98196 1134 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 CDR2Q01850 454 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 BLMHQ13867 455 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 CAPRIN2Q6IMN6 1127 aaKnown RBP14.28□□□□□ -0.12
H3F3B-201ENST00000254810 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 GLIS1Q8NBF1 620 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 CCDC127Q96BQ5 260 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 SAAL1Q96ER3 474 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ZNF577Q9BSK1 485 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 KIAA1683Q9H0B3 1180 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 GPRC5CQ9NQ84 441 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
H3F3B-201ENST00000254810 RASA4BC9J798 803 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 MAP3K13O43283 966 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 RASA4O43374 803 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 GYS1P13807 737 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ECE1P42892 770 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ACVR2BQ13705 512 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TRIM68Q6AZZ1 485 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TATDN1Q6P1N9 297 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 B3GNT9Q6UX72 402 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 DDX27Q96GQ7 796 aaKnown RBP14.28□□□□□ -0.12
H3F3B-201ENST00000254810 NKIRAS1Q9NYS0 192 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 SORBS3O60504 671 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ASMTLO95671 621 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 GH2P01242 217 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 RALAP11233 206 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ATP5DP30049 168 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TUBP50607 506 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 MOGSQ13724 837 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TAF11Q15544 211 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 FAM13CQ8NE31 585 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TTC8Q8TAM2 541 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 SLC7A6OSQ96CW6 309 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-201ENST00000254810 TRAIPQ9BWF2 469 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 UVRAGQ9P2Y5 699 aa14.28□□□□□ -0.12
H3F3B-201ENST00000254810 ATRNL1Q5VV63 1379 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 PPP1R12AO14974 1030 aaPredicted RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 CBX6O95503 412 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 ADSSP30520 456 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 MAPK4P31152 587 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 SKIV2L2P42285 1042 aaKnown RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 POLGP54098 1239 aaPredicted RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 STRN3Q13033 797 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 FASTKD3Q14CZ7 662 aaKnown RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 CEP55Q53EZ4 464 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 ACAD10Q6JQN1 1059 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 TAS1R2Q8TE23 839 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 ZNF483Q8TF39 744 aaPredicted RBP14.27□□□□□ -0.12
H3F3B-201ENST00000254810 PI4K2AQ9BTU6 479 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 SUGT1Q9Y2Z0 365 aa14.27□□□□□ -0.12
H3F3B-201ENST00000254810 A6NHS1 94 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 ENO4A6NNW6 628 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
H3F3B-201ENST00000254810 CDH16O75309 829 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 CETN1Q12798 172 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.13
H3F3B-201ENST00000254810 KLF1Q13351 362 aaPredicted RBP14.27□□□□□ -0.13
H3F3B-201ENST00000254810 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 ZNF449Q6P9G9 518 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 SUPT20HQ8NEM7 779 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 DENND1AQ8TEH3 1009 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 CPA5Q8WXQ8 436 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 NAF1Q96HR8 494 aaKnown RBP14.27□□□□□ -0.13
H3F3B-201ENST00000254810 PHTF1Q9UMS5 762 aa14.27□□□□□ -0.13
H3F3B-201ENST00000254810 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.27□□□□□ -0.13
H3F3B-201ENST00000254810 FAM47DPA6NHR8 397 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 P4HA2O15460 535 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 FDX1P10109 184 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 EPHB2P29323 1055 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 SPP2Q13103 211 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 C4orf33Q8N1A6 199 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 PLCD4Q9BRC7 762 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 KIFC3Q9BVG8 833 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 PI4KBQ9UBF8 816 aa14.26□□□□□ -0.13
H3F3B-201ENST00000254810 CORO1CQ9ULV4 474 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-201ENST00000254810 CLGNO14967 610 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms