RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CPT1AP50416 773 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF699Q32M78 642 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 SYCP2LQ5T4T6 812 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 USP37Q86T82 979 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 CPNE8Q86YQ8 564 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 GLT1D1Q96MS3 346 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 GCOM2Q9BZD3 368 aaPredicted RBP12.52□□□□□ -0.4
LIN28A-201ENST00000254231 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.4
LIN28A-201ENST00000254231 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 INHAP05111 366 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 PTGISQ16647 500 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 CDO1Q16878 200 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 TDRD10Q5VZ19 366 aaKnown RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 JADE1Q6IE81 842 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 CDT1Q9H211 546 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 CEP72Q9P209 647 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 NUB1Q9Y5A7 615 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 ZBTB42B2RXF5 422 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 PPEF2O14830 753 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 NOP14P78316 857 aaKnown RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.41
LIN28A-201ENST00000254231 REXO2Q9Y3B8 237 aaKnown RBP12.52□□□□□ -0.41
LIN28A-201ENST00000254231 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 KCNK3O14649 394 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 PALMO75781 387 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 PBX1P40424 430 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 INHBEP58166 350 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
LIN28A-201ENST00000254231 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
LIN28A-201ENST00000254231 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 WNT8BQ93098 351 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 ACAP3Q96P50 834 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 GAD1Q99259 594 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 GJD2Q9UKL4 321 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 CEP104O60308 925 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 ARL2P36404 184 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 RFC5P40937 340 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 NCKAP1LP55160 1127 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 TRIM14Q14142 442 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 RDM1Q8NG50 284 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 AP1M1Q9BXS5 423 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 MIS12Q9H081 205 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 STARD7Q9NQZ5 370 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
LIN28A-201ENST00000254231 MAP1BP46821 2468 aaKnown RBP12.51□□□□□ -0.41
LIN28A-201ENST00000254231 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 BAP1Q92560 729 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 KAT2BQ92831 832 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 B3GALT6Q96L58 329 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 TRIM7Q9C029 511 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 PLAGL2Q9UPG8 496 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 A0A1W2PQC6 194 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 EXTL3O43909 919 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 SYN1P17600 705 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 EIF4BP23588 611 aaKnown RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ADORA2BP29275 332 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 PDE6CP51160 858 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ACO2Q99798 780 aaKnown RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 SPOPO43791 374 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 MSCO60682 206 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 TACC1O75410 805 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 H2AFZP0C0S5 128 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 MFAP3P55082 362 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 KAZNQ674X7 775 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 MAMDC4Q6UXC1 1216 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 H2AFVQ71UI9 128 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
LIN28A-201ENST00000254231 ARFGEF1Q9Y6D6 1849 aa12.5□□□□□ -0.41
LIN28A-201ENST00000254231 MYH10P35580 1976 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
LIN28A-201ENST00000254231 SERPING1P05155 500 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 GRK4P32298 578 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 SOX5P35711 763 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 GALCP54803 685 aa12.49□□□□□ -0.41
LIN28A-201ENST00000254231 SF3A3Q12874 501 aaKnown RBP eCLIP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms