RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SPATA2LQ8IUW3 424 aaPredicted RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 SRRM1Q8IYB3 904 aaKnown RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 ATL2Q8NHH9 583 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 SCFD1Q8WVM8 642 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 SOCS4Q8WXH5 440 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 EPAS1Q99814 870 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 CFAP69A5D8W1 941 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 KRT38O76015 456 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 ROR1Q01973 937 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 KCTD16Q68DU8 428 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 CATSPERGQ6ZRH7 1159 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 CCDC197Q8NCU1 140 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 SNF8Q96H20 258 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 CGRRF1Q99675 332 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 HPCAL4Q9UM19 191 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 SMAPO00193 183 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 PDHXO00330 501 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 GPR182O15218 404 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 LLGL1Q15334 1064 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 MAPRE1Q15691 268 aaKnown RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 PNMA5Q96PV4 448 aa15.89■□□□□ 0.13
UBE4B-201ENST00000253251 ASCC2Q9H1I8 757 aaPredicted RBP15.89■□□□□ 0.13
UBE4B-201ENST00000253251 PPP1R12AO14974 1030 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CPB1P15086 417 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 RARRES1P49788 294 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 TAF6P49848 677 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 EPHB1P54762 984 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 TRIM65Q6PJ69 517 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 SEMA6BQ9H3T3 888 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 SAYSD1Q9NPB0 183 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 PCSK1NQ9UHG2 260 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 NR1D1P20393 614 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CA4P22748 312 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CEP57Q86XR8 500 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 RYBPQ8N488 228 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 ARHGEF2Q92974 986 aaKnown RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 TMEM106CQ9BVX2 250 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 RSPH10B2B2RC85 870 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 TTI1O43156 1089 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 NCK2O43639 380 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 RSPH10BP0C881 870 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CDH6P55285 790 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CUL2Q13617 745 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 CC2D1AQ6P1N0 951 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 MICAL1Q8TDZ2 1067 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 HPDLQ96IR7 371 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 FAM86B1E9PN63 330 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 GSTA1P08263 222 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 GSTA2P09210 222 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 FAM86B2P0C5J1 330 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 PNMA6AP0CW24 399 aaPredicted RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 SPATA24Q86W54 205 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 TRIM56Q9BRZ2 755 aaKnown RBP15.88■□□□□ 0.13
UBE4B-201ENST00000253251 ZNF518BQ9C0D4 1074 aa15.88■□□□□ 0.13
UBE4B-201ENST00000253251 APOL1O14791 398 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 IRX4P78413 519 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 DEPDC1BQ8WUY9 529 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 WDR24Q96S15 920 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 P2RX7Q99572 595 aaKnown RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 TUBB6Q9BUF5 446 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 KRT14P02533 472 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 PON1P27169 355 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 BIRC2Q13490 618 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 SNX17Q15036 470 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 SH3RF1Q7Z6J0 888 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 FBXO16Q8IX29 292 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 DHX35Q9H5Z1 703 aaKnown RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 KCNMB3Q9NPA1 279 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 HEY1Q9Y5J3 304 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 SLITRK3O94933 977 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 MYCP01106 439 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 ATICP31939 592 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 ZNF211Q13398 564 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 EFHC1Q5JVL4 640 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 SLC30A10Q6XR72 485 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 C4orf50Q6ZRC1 276 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 MTMR14Q8NCE2 650 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 ARRDC4Q8NCT1 418 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 PPP1R2P1Q96PQ5 205 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 DDX47Q9H0S4 455 aaKnown RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 RGPD8O14715 1765 aaPredicted RBP15.87■□□□□ 0.13
UBE4B-201ENST00000253251 TADA3O75528 432 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 PGK2P07205 417 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 GZMAP12544 262 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 PDGFRAP16234 1089 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 HSD17B4P51659 736 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 ZPBP2Q6X784 338 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 WDR49Q8IV35 697 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 FAM129AQ9BZQ8 928 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 CYP3A43Q9HB55 503 aa15.87■□□□□ 0.13
UBE4B-201ENST00000253251 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms