RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 PARP9Q8IXQ6 854 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 TRIM55Q9BYV6 548 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 TMEM117Q9H0C3 514 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 MID2Q9UJV3 735 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 FIS1Q9Y3D6 152 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 PMS1P54277 932 aaKnown RBP13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 EPC2Q52LR7 807 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 MMGT1Q8N4V1 131 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 TUBB6Q9BUF5 446 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 SMARCAD1Q9H4L7 1026 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 ZNF711Q9Y462 761 aa13.45□□□□□ -0.26
PCDHGA12-201ENST00000252085 A0A087X0B3 334 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 MX2P20592 715 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 ROR1Q01973 937 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 ARHGEF6Q15052 776 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 RAB44Q7Z6P3 723 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 ATP11CQ8NB49 1132 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 PON1P27169 355 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SNRPFP62306 86 aaKnown RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 DDX42Q86XP3 938 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 GPRC5CQ9NQ84 441 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 HPCAL4Q9UM19 191 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 hCG_2014768A0A024R1R8 64 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 GOLGA8CPA6NN73 597 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 MAP3K7O43318 606 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 RPS12P25398 132 aaKnown RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 NOP14P78316 857 aaKnown RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SGSM1Q2NKQ1 1148 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 C1orf228Q6PIY5 440 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 SCFD1Q8WVM8 642 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 CHCHD3Q9NX63 227 aaKnown RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 CAPN6Q9Y6Q1 641 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 F5H423 210 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 PPP1R37O75864 691 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 MYCP01106 439 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 RFC5P40937 340 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 ESRRGP62508 458 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 FBXW10Q5XX13 1052 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 THEM5Q8N1Q8 247 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 CHMP6Q96FZ7 201 aa13.44□□□□□ -0.26
PCDHGA12-201ENST00000252085 STX1BP61266 288 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 NT5DC1Q5TFE4 455 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 ARHGAP18Q8N392 663 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 LRRC71Q8N4P6 559 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 ZNF513Q8N8E2 541 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 TBX20Q9UMR3 447 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 DCTN3O75935 186 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 NCF2P19878 526 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 RYBPQ8N488 228 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 HVCN1Q96D96 273 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 CELF4Q9BZC1 486 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 GOLGA8QA0A0J9YX86 632 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 GOLGA8OA6NCC3 632 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 GOLGA8NF8WBI6 632 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 PIK3R2O00459 728 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 RGL2O15211 777 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 CYTH3O43739 400 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 BYSLQ13895 437 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 KYAT1Q16773 422 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 MYLK4Q86YV6 388 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 KIAA0895Q8NCT3 520 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 ZKSCAN4Q969J2 545 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 IL17RAQ96F46 866 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 FGD4Q96M96 766 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 DDX4Q9NQI0 724 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 PPARGC1AQ9UBK2 798 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 SHPRHQ149N8 1683 aa13.43□□□□□ -0.26
PCDHGA12-201ENST00000252085 EXTL3O43909 919 aa13.42□□□□□ -0.26
PCDHGA12-201ENST00000252085 PSMD7P51665 324 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms