RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PAAF1Q9BRP4 392 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 CHST7Q9NS84 486 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 BRWD1Q9NSI6 2320 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 TTC26A0AVF1 554 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 H3BQ06 376 aaPredicted RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 EIF3DO15371 548 aaKnown RBP eCLIP26.52■■□□□ 1.841e-9■■■■■ 33.4
SDF2L1-201ENST00000248958 XPOTO43592 962 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 FAM189A1O60320 539 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 CLASP2O75122 1294 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 CXCL8P10145 99 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 RPL9P32969 192 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 ANP32AP39687 249 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 AFMP43652 599 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 CASP5P51878 434 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 DSG1Q02413 1049 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 UPP1Q16831 310 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 FAM26FQ5R3K3 315 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 AUTS2Q8WXX7 1259 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 POMGNT1Q8WZA1 660 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 ZMAT2Q96NC0 199 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 CD207Q9UJ71 328 aa26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 CPSF3Q9UKF6 684 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 AGO2Q9UKV8 859 aaKnown RBP26.52■■□□□ 1.84
SDF2L1-201ENST00000248958 F8W810 466 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 LILRB3O75022 631 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 KIF4AO95239 1232 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 GLP2RO95838 553 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 LDHAP00338 332 aaKnown RBP26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 ADRB2P07550 413 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 TNFSF9P41273 254 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 CLCNKBP51801 687 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 DLX2Q07687 328 aaPredicted RBP26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 KIAA0319Q5VV43 1072 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 PTCRAQ6ISU1 281 aaPredicted RBP26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 FSIP1Q8NA03 581 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 PAGE5Q96GU1 130 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 MSLNLQ96KJ4 702 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 GPR62Q9BZJ7 368 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 BLZF1Q9H2G9 400 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 GDPD2Q9HCC8 539 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.51■■□□□ 1.833e-8■■■□□ 16.2
SDF2L1-201ENST00000248958 CLEC1BQ9P126 229 aa26.51■■□□□ 1.83
SDF2L1-201ENST00000248958 UBE4BO95155 1302 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 TRAPPC3O43617 180 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 B3GAT3O94766 335 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 PRPF6O94906 941 aaKnown RBP26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 GARTP22102 1010 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 NDUFA8P51970 172 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 CREMQ03060 361 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 EHHADHQ08426 723 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 KCNA1Q09470 495 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 CUL4BQ13620 913 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 TAS1R1Q7RTX1 841 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 RABGGTAQ92696 567 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 CCDC34Q96HJ3 373 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 KLHL5Q96PQ7 755 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 RXFP1Q9HBX9 757 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 CACNG4Q9UBN1 327 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 UBQLN1Q9UMX0 589 aaKnown RBP26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 HCFC2Q9Y5Z7 792 aa26.5■■□□□ 1.83
SDF2L1-201ENST00000248958 TCF20Q9UGU0 1960 aaKnown RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 GOLGA6L4A6NEF3 574 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 GRXCR2A6NFK2 248 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 KIAA0391O15091 583 aaKnown RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 MEFVO15553 781 aaPredicted RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 HOXB8P17481 243 aaPredicted RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 CYP3A5P20815 502 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 SMAD4Q13485 552 aaKnown RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 ENOX2Q16206 610 aaKnown RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 PDXDC1Q6P996 788 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 ZNF507Q8TCN5 953 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 FGFBP2Q9BYJ0 223 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 ASB7Q9H672 318 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 GOLGA2P5Q9HBQ8 144 aa26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 BARX2Q9UMQ3 279 aaPredicted RBP26.49■■□□□ 1.83
SDF2L1-201ENST00000248958 LACTBL1A8MY62 500 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 TISP43B9A030 160 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 PODXLO00592 558 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 C1RP00736 705 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 CNPP09543 421 aaKnown RBP26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 KLRC2P26717 231 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 SOX4Q06945 474 aaPredicted RBP26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 VN1R2Q8NFZ6 395 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 ADAMTS19Q8TE59 1207 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 HASPINQ8TF76 798 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 KIF12Q96FN5 646 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 FNIP2Q9P278 1114 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 DERAQ9Y315 318 aa26.48■■□□□ 1.83
SDF2L1-201ENST00000248958 C2CD2LO14523 706 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 MBTPS2O43462 519 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 ADH1AP07327 375 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 ADSSP30520 456 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 SNRPFP62306 86 aaKnown RBP26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 PSMD2Q13200 908 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 ZBTB6Q15916 424 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 ZBTB41Q5SVQ8 909 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 FAM171A1Q5VUB5 890 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 ANKRD54Q6NXT1 300 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 LLGL2Q6P1M3 1020 aa26.47■■□□□ 1.83
SDF2L1-201ENST00000248958 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms