RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 PIK3CAP42336 1068 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 EPC2Q52LR7 807 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 C15orf39Q6ZRI6 1047 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 MRPL10Q7Z7H8 261 aaKnown RBP20.73■□□□□ 0.91
SBDS-201ENST00000246868 EFCAB13Q8IY85 973 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 EHBP1Q8NDI1 1231 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 KIF12Q96FN5 646 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
SBDS-201ENST00000246868 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 UBN1Q9NPG3 1134 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 CNTN3Q9P232 1028 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
SBDS-201ENST00000246868 R3HCC1Q9Y3T6 440 aaKnown RBP20.73■□□□□ 0.91
SBDS-201ENST00000246868 TRIP11Q15643 1979 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 XPOTO43592 962 aaKnown RBP20.72■□□□□ 0.91
SBDS-201ENST00000246868 NFICP08651 508 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 SLC9A1P19634 815 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 TBX2Q13207 712 aaPredicted RBP20.72■□□□□ 0.91
SBDS-201ENST00000246868 GPNMBQ14956 572 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 TDRD10Q5VZ19 366 aaKnown RBP20.72■□□□□ 0.91
SBDS-201ENST00000246868 TRIM65Q6PJ69 517 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 TRAPPC11Q7Z392 1133 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 DEFB128Q7Z7B8 93 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 RNF169Q8NCN4 708 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 CCDC150Q8NCX0 1101 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 ZNF397Q8NF99 534 aaPredicted RBP20.72■□□□□ 0.91
SBDS-201ENST00000246868 TAS1R2Q8TE23 839 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 CPLX3Q8WVH0 158 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 RAB20Q9NX57 234 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 GIT1Q9Y2X7 761 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 SCN5AQ14524 2016 aa20.72■□□□□ 0.91
SBDS-201ENST00000246868 MEFVO15553 781 aaPredicted RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 GYPCP04921 128 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 IBSPP21815 317 aaPredicted RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 TRPC3Q13507 836 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 WDR44Q5JSH3 913 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 ALKAL1Q6UXT8 129 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 CCDC186Q7Z3E2 898 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 CACNA2D4Q7Z3S7 1137 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 ECHDC2Q86YB7 292 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 CNGA4Q8IV77 575 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 RPS6KC1Q96S38 1066 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 EDEM3Q9BZQ6 932 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 IMPG2Q9BZV3 1241 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 KLK14Q9P0G3 267 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 LUC7L2Q9Y383 392 aaKnown RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 DAAM1Q9Y4D1 1078 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 A0A1W2PQJ5 194 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 C9IYK1 514 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 AKR1B15C9JRZ8 316 aaPredicted RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 CLSTN1O94985 981 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 EOMESO95936 686 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 HLA-DRAP01903 254 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 KCNE1P15382 129 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 CASP14P31944 242 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 TMEM199Q8N511 208 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 TRIM43Q96BQ3 446 aaPredicted RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 RNF216Q9NWF9 866 aaPredicted RBP20.71■□□□□ 0.91
SBDS-201ENST00000246868 CEP72Q9P209 647 aa20.71■□□□□ 0.91
SBDS-201ENST00000246868 TET1Q8NFU7 2136 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 ZC3H11AO75152 810 aaKnown RBP eCLIP20.7■□□□□ 0.9
SBDS-201ENST00000246868 ACTN1P12814 892 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 RFX1P22670 979 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 NCOA4Q13772 614 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 XKR4Q5GH76 650 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 KLHDC7AQ5VTJ3 777 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
SBDS-201ENST00000246868 BEST2Q8NFU1 509 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 LMO3Q8TAP4 145 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 FAM84AQ96KN4 292 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 NT5C1BQ96P26 610 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 RSAD1Q9HA92 442 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 APEX2Q9UBZ4 518 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 CAPN11Q9UMQ6 739 aa20.7■□□□□ 0.9
SBDS-201ENST00000246868 UBQLN1Q9UMX0 589 aaKnown RBP20.7■□□□□ 0.9
SBDS-201ENST00000246868 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.7■□□□□ 0.9
SBDS-201ENST00000246868 SMIM28A0A1B0GU29 152 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 RBAK-RBAKDNI3L0D1 243 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 UCHL3P15374 230 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 POLR2FP61218 127 aaKnown RBP20.69■□□□□ 0.9
SBDS-201ENST00000246868 FAM189BP81408 668 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 TSR1Q2NL82 804 aaKnown RBP20.69■□□□□ 0.9
SBDS-201ENST00000246868 CNKSR3Q6P9H4 555 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 AGMOQ6ZNB7 445 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 LINC01599Q8WXQ3 324 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 SEMA4DQ92854 862 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 LPPQ93052 612 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 HTATIP2Q9BUP3 242 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 TTYH3Q9C0H2 523 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 DPP3Q9NY33 737 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 FBXL5Q9UKA1 691 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 ITGA11Q9UKX5 1188 aa20.69■□□□□ 0.9
SBDS-201ENST00000246868 ENPP3O14638 875 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 NOL4O94818 638 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 KRT19P08727 400 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 MLH1P40692 756 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 ZBED6P86452 979 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 GLRA4Q5JXX5 417 aa20.68■□□□□ 0.9
SBDS-201ENST00000246868 MFSD5Q6N075 450 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms