RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DAB1O75553 588 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 IFI35P80217 286 aaPredicted RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 SLC9A5Q14940 896 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 FAM180AQ6UWF9 173 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 OR6P1Q8NGX9 317 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 CTNNAL1Q9UBT7 734 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 MAFGO15525 162 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 ZNF699Q32M78 642 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 SLC20A1Q8WUM9 679 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 A0A087X0T9 212 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 FAM228BP0C875 321 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 FSCBQ5H9T9 825 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 FAM182AQ5T1J6 154 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 SWSAP1Q6NVH7 229 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TRIM11Q96F44 468 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 LXNQ9BS40 222 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MOSPD1Q9UJG1 213 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 SAC3D1A6NKF1 404 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ZNF568Q3ZCX4 644 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 PYGMP11217 842 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TYK2P29597 1187 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ZSCAN18Q8TBC5 510 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 MAGEF1Q9HAY2 307 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 DDX20Q9UHI6 824 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 PHF2O75151 1096 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ATP5HO75947 161 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 H2AFXP16104 143 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 ROGDIQ9GZN7 287 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 NRBP2Q9NSY0 501 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ARMCX1Q9P291 453 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MAGEA4P43358 317 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MADCAM1Q13477 382 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 SCN4BQ8IWT1 228 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TSEN2Q8NCE0 465 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 RPF1Q9H9Y2 349 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 MAP4P27816 1152 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 GABPB2Q8TAK5 448 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 NEU2Q9Y3R4 380 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 FAM47DPA6NHR8 397 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 K7ERI5 159 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 GLI1P08151 1106 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 AMHR2Q16671 573 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 LLGL2Q6P1M3 1020 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 POU5F2Q8N7G0 328 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 KAT2BQ92831 832 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 POP1Q99575 1024 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 PHTF1Q9UMS5 762 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 LAMC1P11047 1609 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 NBPF26B4DH59 902 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 SNX2O60749 519 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 WEE2P0C1S8 567 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 NBPF15Q8N660 670 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ASZ1Q8WWH4 475 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MYO5CQ9NQX4 1742 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 CLTCL1P53675 1640 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 M0QZ92 97 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 NUDT2P50583 147 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MTDHQ86UE4 582 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 PPHLN1Q8NEY8 458 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 REEP2Q9BRK0 252 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 NDFIP2Q9NV92 336 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TFE3P19532 575 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 GCLCP48506 637 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 DCAF4L1Q3SXM0 396 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 SNX19Q92543 992 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 DDX50Q9BQ39 737 aaKnown RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 APOL2Q9BQE5 337 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 KRT37O76014 449 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 TAC1P20366 129 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 OSBPP22059 807 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ATP2C1P98194 919 aaPredicted RBP7.92□□□□□ -1.14
RIF1-201ENST00000243326 FAM71DQ8N9W8 422 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 RNF14Q9UBS8 474 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 MED21Q13503 144 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 COG2Q14746 738 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 HIF1AQ16665 826 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 QRICH1Q2TAL8 776 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ATP11CQ8NB49 1132 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 OLFM3Q96PB7 478 aa7.92□□□□□ -1.14
RIF1-201ENST00000243326 ANO9A1A5B4 782 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SGPL1O95470 568 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 EXOSC10Q01780 885 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 ZC3H12BQ5HYM0 836 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 DCUN1D5Q9BTE7 237 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 RANBP17Q9H2T7 1088 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 ZFYVE16Q7Z3T8 1539 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ERBB3P21860 1342 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 CELF1Q92879 486 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 FRA10AC1Q70Z53 315 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 THAP2Q9H0W7 228 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SLC9A2Q9UBY0 812 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 CPSF3Q9UKF6 684 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 SEMA3EO15041 775 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 RTN2O75298 545 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 AGTP01019 485 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 BRD2P25440 801 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms