RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 NLRP11P59045 1033 aaKnown RBP9.36□□□□□ -0.91
VPS4B-201ENST00000238497 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 UGCGQ16739 394 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 FBXO47Q5MNV8 452 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS4B-201ENST00000238497 GDPD5Q8WTR4 605 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 CRYGNQ8WXF5 182 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 IFT81Q8WYA0 676 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 FAM212AQ96EL1 285 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 PNKPQ96T60 521 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
VPS4B-201ENST00000238497 ABCB6Q9NP58 842 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 INSL6Q9Y581 213 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 PCDHA2Q9Y5H9 948 aa9.36□□□□□ -0.91
VPS4B-201ENST00000238497 A0A087X0T9 212 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 OATP04181 439 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 FAM228BP0C875 321 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ADAM17P78536 824 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 TAP1Q03518 808 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 SPIRE1Q08AE8 756 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ORC2Q13416 577 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-201ENST00000238497 GPR161Q8N6U8 529 aaKnown RBP9.35□□□□□ -0.91
VPS4B-201ENST00000238497 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 SLC5A5Q92911 643 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ERGIC2Q96RQ1 377 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 PADI3Q9ULW8 664 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ZNF862O60290 1169 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 CAND2O75155 1236 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ATG7O95352 703 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 ATP4AP20648 1035 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 VAV2P52735 878 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 NAA35Q5VZE5 725 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 LMBRD2Q68DH5 695 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-201ENST00000238497 KLHL7Q8IXQ5 586 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 USP38Q8NB14 1042 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 CENPHQ9H3R5 247 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 RABEP2Q9H5N1 569 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 PLAGL2Q9UPG8 496 aa9.35□□□□□ -0.91
VPS4B-201ENST00000238497 MORC2Q9Y6X9 1032 aaPredicted RBP9.35□□□□□ -0.91
VPS4B-201ENST00000238497 MBLAC1A4D2B0 266 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 KRT13P13646 458 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 VSNL1P62760 191 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 BTG3Q14201 252 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 LONRF2Q1L5Z9 754 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 Q4G0T1 1027 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 PDXDC1Q6P996 788 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 TSHZ1Q6ZSZ6 1077 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 KIAA0319LQ8IZA0 1049 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 ZSWIM2Q8NEG5 633 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 CEP170P1Q96L14 293 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 C17orf80Q9BSJ5 609 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 VAV3Q9UKW4 847 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 HOXC8P31273 242 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 APBB2Q92870 758 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 NLRP4Q96MN2 994 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 SALL4Q9UJQ4 1053 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 DLL1O00548 723 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 MAGEB2O15479 319 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 ERLIN1O75477 346 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 PSMD10O75832 226 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 FGFR4P22455 802 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 PTK2Q05397 1052 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 POP1Q99575 1024 aaKnown RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 KCTD10Q9H3F6 313 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 ACP6Q9NPH0 428 aa9.34□□□□□ -0.91
VPS4B-201ENST00000238497 NOC2LQ9Y3T9 749 aaKnown RBP9.34□□□□□ -0.91
VPS4B-201ENST00000238497 CYP3A7-CYP3A51PA0A087WV96 503 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 ESYT3A0FGR9 886 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EIF3CLB5ME19 914 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PALMO75781 387 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 UCHL3P15374 230 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CYP3A7P24462 503 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CTNNB1P35222 781 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 HSP90B2PQ58FF3 399 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 XKR3Q5GH77 459 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CC2D1AQ6P1N0 951 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 RHPN2Q8IUC4 686 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PPM1KQ8N3J5 372 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 FIBCD1Q8N539 461 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 RABGGTAQ92696 567 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms