RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 TSPAN18Q96SJ8 248 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 THAP9Q9H5L6 903 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 CBX8Q9HC52 389 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 CNTN3Q9P232 1028 aa11.03□□□□□ -0.64
HMGCL-201ENST00000235958 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 TDRD15B5MCY1 1934 aaKnown RBP11.03□□□□□ -0.64
HMGCL-201ENST00000235958 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 DDHD2O94830 711 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 ALDH2P05091 517 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 DLATP10515 647 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 MYOGP15173 224 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 TNNI1P19237 187 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 VAMP7P51809 220 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 CLDN10P78369 228 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 RNASELQ05823 741 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 TMEM132DQ14C87 1099 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 NAB2Q15742 525 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 DUOXA2Q1HG44 320 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 LUZP1Q86V48 1076 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 CMTR2Q8IYT2 770 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 CACTINQ8WUQ7 758 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 RSPH1Q8WYR4 309 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 C18orf25Q96B23 403 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 FAM193BQ96PV7 902 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 NRDE2Q9H7Z3 1164 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 RC3H2Q9HBD1 1191 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
HMGCL-201ENST00000235958 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 DERAQ9Y315 318 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 TRIOBPQ9H2D6 2365 aa11.02□□□□□ -0.65
HMGCL-201ENST00000235958 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 BECN2A8MW95 431 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 NFICP08651 508 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 CDK11BP21127 795 aaKnown RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 PBX2P40425 430 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 MARSP56192 900 aaKnown RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 SOX4Q06945 474 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 BFSP1Q12934 665 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 GRIK3Q13003 919 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 LMBRD2Q68DH5 695 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 FAM114A1Q8IWE2 563 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 TRIM59Q8IWR1 403 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 TMEM130Q8N3G9 435 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 FIBCD1Q8N539 461 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 OR5B17Q8NGF7 314 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 RABGGTAQ92696 567 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 HSD3B7Q9H2F3 369 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 CWH43Q9H720 699 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 MAGEC2Q9UBF1 373 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-201ENST00000235958 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 DNAJB4Q9UDY4 337 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 C2CD2Q9Y426 696 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 PTPRJQ12913 1337 aa11.01□□□□□ -0.65
HMGCL-201ENST00000235958 LCHNA4D1U4 455 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 KCNJ18B7U540 433 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 XPOTO43592 962 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 B4GALT3O60512 393 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 GALTP07902 379 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 TRIM49P0CI25 452 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 TRIM49CP0CI26 452 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 CYP3A5P20815 502 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 RPL9P32969 192 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 MTIF2P46199 727 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 ALDH7A1P49419 539 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 GUCY2FP51841 1108 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 ENPEPQ07075 957 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 PPP3CAQ08209 521 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 DSC1Q08554 894 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 TUSC3Q13454 348 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 KCNJ12Q14500 433 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 TCP11X2Q5H9J9 407 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 SPOUT1Q5T280 376 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 CDKAL1Q5VV42 579 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 TCERG1LQ5VWI1 586 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 USP37Q86T82 979 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 WDR49Q8IV35 697 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 COLGALT2Q8IYK4 626 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 BEST2Q8NFU1 509 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 FAM200AQ8TCP9 573 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 CNOT6LQ96LI5 555 aaKnown RBP11□□□□□ -0.65
HMGCL-201ENST00000235958 CGRRF1Q99675 332 aa11□□□□□ -0.65
HMGCL-201ENST00000235958 GOLGA2P5Q9HBQ8 144 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms