RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 CCSER1Q9C0I3 900 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 DKK3Q9UBP4 350 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 ANKRD63C9JTQ0 380 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
MSH2-201ENST00000233146 IRF2BP2Q7Z5L9 587 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
MSH2-201ENST00000233146 PLEKHG3A1L390 1219 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 AQP4P55087 323 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 FUT2Q10981 343 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 SCARF1Q14162 830 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CLUL1Q15846 466 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ELMSAN1Q6PJG2 1045 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CYFIP1Q7L576 1253 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 NSMCE3Q96MG7 304 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 SH3GL1Q99961 368 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 MRPS26Q9BYN8 205 aaKnown RBP13.79□□□□□ -0.2
MSH2-201ENST00000233146 MAGEF1Q9HAY2 307 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 THEGQ9P2T0 379 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 PXDNQ92626 1479 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 KRT13P13646 458 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ZAP70P43403 619 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CASP7P55210 303 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 FBXL19Q6PCT2 694 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 BIRC8Q96P09 236 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 NPHS2Q9NP85 383 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 LZTS1Q9Y250 596 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CCDC88AQ3V6T2 1871 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
MSH2-201ENST00000233146 DNAJC6O75061 913 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 DGKIO75912 1065 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 TTC4O95801 387 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 EPS15P42566 896 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ASIC1P78348 528 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 DMPKQ09013 629 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
MSH2-201ENST00000233146 CDK5RAP3Q96JB5 506 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ZKSCAN3Q9BRR0 538 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 KLHL4Q9C0H6 718 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 NDEL1Q9GZM8 345 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 TBK1Q9UHD2 729 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 CEPT1Q9Y6K0 416 aa13.79□□□□□ -0.2
MSH2-201ENST00000233146 ATRNO75882 1429 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 A0A088AWK7 358 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 CDH16O75309 829 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 FKBP6O75344 327 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 ESRRAP11474 423 aaPredicted RBP13.78□□□□□ -0.2
MSH2-201ENST00000233146 CDH2P19022 906 aaPredicted RBP13.78□□□□□ -0.2
MSH2-201ENST00000233146 TKTP29401 623 aaKnown RBP13.78□□□□□ -0.2
MSH2-201ENST00000233146 CETN2P41208 172 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 SLC18A1P54219 525 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 ALX1Q15699 326 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 TXNRD1Q16881 649 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
MSH2-201ENST00000233146 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
MSH2-201ENST00000233146 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 MGEA5O60502 916 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 UBA7P41226 1012 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 STT3AP46977 705 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 ENTPD1P49961 510 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 C16orf72Q14CZ0 275 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 BTBD9Q96Q07 612 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 QPCTLQ9NXS2 382 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 HEY2Q9UBP5 337 aa13.78□□□□□ -0.2
MSH2-201ENST00000233146 SOBPA7XYQ1 873 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 ADCY6O43306 1168 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 SPAG7O75391 227 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 CD48P09326 243 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 H2AFZP0C0S5 128 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 VDRP11473 427 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 HOXC9P31274 260 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 ADD2P35612 726 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 PHKA2P46019 1235 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 LRRC63Q05C16 580 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 LRRC24Q50LG9 513 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 ZNF394Q53GI3 561 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 FYB2Q5VWT5 728 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 AAGABQ6PD74 315 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 H2AFVQ71UI9 128 aa13.77□□□□□ -0.2
MSH2-201ENST00000233146 MARVELD2Q8N4S9 558 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms