RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ABL2P42684 1182 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 TUBP50607 506 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CWF19L1Q69YN2 538 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 HOOK3Q86VS8 718 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 NSRP1Q9H0G5 558 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 HOMER3Q9NSC5 361 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 FGFR1OP2Q9NVK5 253 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 SYNGAP1Q96PV0 1343 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 TCP10L2B9ZVM9 353 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 MAP3K13O43283 966 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 RTN3O95197 1032 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 ITGB5P18084 799 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CHRNA3P32297 505 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 EPC2Q52LR7 807 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 STRIP1Q5VSL9 837 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 PHLDB2Q86SQ0 1253 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 UBL4BQ8N7F7 174 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCHCR1Q8TD31 782 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 SEMA4DQ92854 862 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 PGM2Q96G03 612 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 GLIS2Q9BZE0 524 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CNOT10Q9H9A5 744 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 EBF2Q9HAK2 575 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 RIPK2O43353 540 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 ADRB2P07550 413 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 VIL1P09327 827 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 DRG2P55039 364 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 SIX1Q15475 284 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 TBC1D25Q3MII6 688 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 STXBP4Q6ZWJ1 553 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CD101Q93033 1021 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 IFT74Q96LB3 600 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 LMCD1Q9NZU5 365 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 PCYOX1Q9UHG3 505 aa10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 NOCTQ9UK39 431 aaKnown RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 COL2A1P02458 1487 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOA-201ENST00000229829 TP73O15350 636 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 PPIP5K2O43314 1243 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 TPP2P29144 1249 aaPredicted RBP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 ALDH1B1P30837 517 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 COILP38432 576 aaPredicted RBP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 BLMHQ13867 455 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 LONRF1Q17RB8 773 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 C11orf63Q6NUN7 778 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 KLHL23Q8NBE8 558 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 C1orf54Q8WWF1 131 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 ABTB1Q969K4 478 aaPredicted RBP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 NUP85Q9BW27 656 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 TRIM7Q9C029 511 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 COL20A1Q9P218 1284 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 RASAL2Q9UJF2 1139 aa10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZMYND8Q9ULU4 1186 aaPredicted RBP10.02□□□□□ -0.8
HLA-DOA-201ENST00000229829 MIF4GDA9UHW6 222 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 CLDN3O15551 220 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SPOPO43791 374 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 AHCYL1O43865 530 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 PFDN1O60925 122 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 DLATP10515 647 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 CCND1P24385 295 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 GBP1P32455 592 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 MSH2P43246 934 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SERPINB4P48594 390 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 HADHBP55084 474 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SPP2Q13103 211 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 AUHQ13825 339 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 PPP2R5EQ16537 467 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 DBN1Q16643 649 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 C2CD6Q53TS8 623 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 EAPPQ56P03 285 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 INTS8Q75QN2 995 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SPATA21Q7Z572 469 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZC3H18Q86VM9 953 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC13A5Q86YT5 568 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 CBWD2Q8IUF1 395 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZNF564Q8TBZ8 553 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 PWWP2AQ96N64 755 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 TEKT3Q9BXF9 490 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 METTL5Q9NRN9 209 aaKnown RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC5A4Q9NY91 659 aa10.02□□□□□ -0.81
HLA-DOA-201ENST00000229829 RPS6KL1Q9Y6S9 549 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms