RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 SEC14L4Q9UDX3 406 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 PCDHGA3Q9Y5H0 932 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 MLH3Q9UHC1 1453 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 CUL9Q8IWT3 2517 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 SPDYE5A6NIY4 337 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 POLR2DO15514 142 aaKnown RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 ZRANB2O95218 330 aaKnown RBP eCLIP5.56□□□□□ -1.52
KRR1-201ENST00000229214 CCDC159P0C7I6 412 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 RPS6KB1P23443 525 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 PEX5P50542 639 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 PPIDQ08752 370 aaKnown RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 TBC1D1Q86TI0 1168 aaPredicted RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 ATP6V1E2Q96A05 226 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 EFCAB6Q5THR3 1501 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 PIPSLA2A3N6 862 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 TRPC5OSA6NMA1 111 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 REM1O75628 298 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 GCNT3O95395 438 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 RXRAP19793 462 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 PTX3P26022 381 aaPredicted RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 IL6STP40189 918 aaPredicted RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 RFX4Q33E94 735 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 BICRALQ6AI39 1079 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 CYP4F22Q6NT55 531 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 TRIM65Q6PJ69 517 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 HAUS6Q7Z4H7 955 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 ZDHHC17Q8IUH5 632 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 APPL2Q8NEU8 664 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 RIN2Q8WYP3 895 aaPredicted RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 FKBP10Q96AY3 582 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 QRFPRQ96P65 431 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
KRR1-201ENST00000229214 XDHP47989 1333 aa5.56□□□□□ -1.52
KRR1-201ENST00000229214 FGAP02671 866 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 PLTPP55058 493 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 MYL7Q01449 175 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ZNF394Q53GI3 561 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 TRAPPC3LQ5T215 181 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 TMTC4Q5T4D3 741 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ESRP1Q6NXG1 681 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 SRBD1Q8N5C6 995 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 HELQQ8TDG4 1101 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 NFE2L3Q9Y4A8 694 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 PRPSAP2O60256 369 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 SNX2O60749 519 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 MED24O75448 989 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 WDR47O94967 919 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ZBED1O96006 694 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 IREB2P48200 963 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 NIPAL1Q6NVV3 410 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 C16orf87Q6PH81 154 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 CDKL3Q8IVW4 592 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.52
KRR1-201ENST00000229214 MSL3Q8N5Y2 521 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 TSC22D3Q99576 134 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ZNF518BQ9C0D4 1074 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 KLHL28Q9NXS3 571 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 LSM7Q9UK45 103 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 EXOC1LA0A1B0GW35 172 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 H3BNX3 289 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 OSBPP22059 807 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 CHMLP26374 656 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 STIP1P31948 543 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 PHKA2P46019 1235 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 CASP5P51878 434 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ATN1P54259 1190 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 SF3B3Q15393 1217 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 WLSQ5T9L3 541 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 S100A7AQ86SG5 101 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 URGCPQ8TCY9 931 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 MRPL1Q9BYD6 325 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 ZBTB40Q9NUA8 1239 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 SQORQ9Y6N5 450 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 DLC1Q96QB1 1528 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 VGLL3A8MV65 326 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 FAM47E-STBD1D6RA91 191 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 HNRNPDLO14979 420 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 ESRRAP11474 423 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 CTCFP49711 727 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 VPS41P49754 854 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 PIGHQ14442 188 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 DACT3Q96B18 629 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 OSBPL6Q9BZF3 934 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.55□□□□□ -1.52
KRR1-201ENST00000229214 GMIPQ9P107 970 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 RBM8AQ9Y5S9 174 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 CPSF1Q10570 1443 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 ELF1P32519 619 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 CYP2C18P33260 490 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 GALNT3Q14435 633 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 INTS11Q5TA45 600 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 APOBEC3FQ8IUX4 373 aaKnown RBP5.55□□□□□ -1.52
KRR1-201ENST00000229214 FAM210AQ96ND0 272 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 ZWILCHQ9H900 591 aa5.55□□□□□ -1.52
KRR1-201ENST00000229214 SNX14Q9Y5W7 946 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms