RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 NENFQ9UMX5 172 aa18.11■□□□□ 0.49
TVP23C-201ENST00000225576 KAT6AQ92794 2004 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 ATP8B3O60423 1300 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 PHACTR2O75167 634 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 STAG3L1P0CL83 205 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 EIF4BP23588 611 aaKnown RBP18.1■□□□□ 0.49
TVP23C-201ENST00000225576 TMEM62Q0P6H9 643 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 NAB2Q15742 525 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 CEP120Q8N960 986 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 SLC30A5Q8TAD4 765 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 FAM84AQ96KN4 292 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 CDHR5Q9HBB8 845 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 SAGE1Q9NXZ1 904 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 GTF2IRD1Q9UHL9 959 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 TFR2Q9UP52 801 aa18.1■□□□□ 0.49
TVP23C-201ENST00000225576 RIOK3O14730 519 aaKnown RBP18.09■□□□□ 0.49
TVP23C-201ENST00000225576 FKTNO75072 461 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 CAPN15O75808 1086 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 AXLP30530 894 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 OSTNP61366 133 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 DCAF4L1Q3SXM0 396 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 CCSAPQ6IQ19 270 aaPredicted RBP18.09■□□□□ 0.49
TVP23C-201ENST00000225576 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
TVP23C-201ENST00000225576 CATSPER4Q7RTX7 472 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 TRAPPC11Q7Z392 1133 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 MYRIPQ8NFW9 859 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 FAM212AQ96EL1 285 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 OSMRQ99650 979 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 GINS2Q9Y248 185 aa18.09■□□□□ 0.49
TVP23C-201ENST00000225576 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.494e-6■■■■■ 27.3
TVP23C-201ENST00000225576 HOXA11P31270 313 aaPredicted RBP18.08■□□□□ 0.49
TVP23C-201ENST00000225576 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.49
TVP23C-201ENST00000225576 PRMT2P55345 433 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 NCOA4Q13772 614 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 SNX17Q15036 470 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 SLC35F6Q8N357 371 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 PCSK9Q8NBP7 692 aaKnown RBP18.08■□□□□ 0.49
TVP23C-201ENST00000225576 OLIG1Q8TAK6 271 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 ASB7Q9H672 318 aa18.08■□□□□ 0.49
TVP23C-201ENST00000225576 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.08■□□□□ 0.493e-6■■■■■ 37.3
TVP23C-201ENST00000225576 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.49
TVP23C-201ENST00000225576 TNNC2P02585 160 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 RPLP2P05387 115 aaKnown RBP18.08■□□□□ 0.48
TVP23C-201ENST00000225576 ASGR1P07306 291 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 CXCL8P10145 99 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 FGFR4P22455 802 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 GRM5P41594 1212 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 KCNA10Q16322 511 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 NOTUMQ6P988 496 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 TMEM192Q8IY95 271 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 RNF10Q8N5U6 811 aaKnown RBP18.08■□□□□ 0.48
TVP23C-201ENST00000225576 SECISBP2LQ93073 1101 aaKnown RBP18.08■□□□□ 0.48
TVP23C-201ENST00000225576 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 AGPAT1Q99943 283 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 IMPG2Q9BZV3 1241 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 INTUQ9ULD6 942 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 DUSP10Q9Y6W6 482 aa18.08■□□□□ 0.48
TVP23C-201ENST00000225576 LACTBL1A8MY62 500 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 ASS1P00966 412 aaKnown RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 TMEM191BP0C7N4 346 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 TNFAIP3P21580 790 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 TBXAS1P24557 533 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 USP8P40818 1118 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 NOP14P78316 857 aaKnown RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 TFAMQ00059 246 aaKnown RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 SLC27A1Q6PCB7 646 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 CD302Q8IX05 232 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 EFCAB13Q8IY85 973 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 LNX1Q8TBB1 728 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 ACAP3Q96P50 834 aa18.07■□□□□ 0.48
TVP23C-201ENST00000225576 APOBEC3GQ9HC16 384 aaKnown RBP18.07■□□□□ 0.48
TVP23C-201ENST00000225576 CTAGE9A4FU28 777 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 BTNL10A8MVZ5 291 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 CST3P01034 146 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-201ENST00000225576 CUL2Q13617 745 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 SGSM1Q2NKQ1 1148 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 SLC10A6Q3KNW5 377 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 RSPH3Q86UC2 560 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 NT5DC4Q86YG4 428 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 GLYCTKQ8IVS8 523 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 SLAIN1Q8ND83 568 aa18.06■□□□□ 0.48
TVP23C-201ENST00000225576 ZNF296Q8WUU4 475 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-201ENST00000225576 DHX38Q92620 1227 aaKnown RBP18.06■□□□□ 0.48
TVP23C-201ENST00000225576 NAPGQ99747 312 aaPredicted RBP18.06■□□□□ 0.48
TVP23C-201ENST00000225576 CELF4Q9BZC1 486 aaKnown RBP18.06■□□□□ 0.48
TVP23C-201ENST00000225576 SCN10AQ9Y5Y9 1956 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 MROH7Q68CQ1 1323 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 MACROD2A1Z1Q3 448 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 MEFVO15553 781 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 CYP26A1O43174 497 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TACC1O75410 805 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms