RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ZC3H3Q8IXZ2 948 aaKnown RBP25.66■■□□□ 1.7
HOMER3-201ENST00000221222 SAMD11Q96NU1 681 aa25.66■■□□□ 1.7
HOMER3-201ENST00000221222 TGS1Q96RS0 853 aaKnown RBP25.66■■□□□ 1.7
HOMER3-201ENST00000221222 BICDL2A1A5D9 508 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 TRIM49BA6NDI0 452 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 B4GALT3O60512 393 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 LAG3P18627 525 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 ADAM9Q13443 819 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 GLRA4Q5JXX5 417 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 TTI2Q6NXR4 508 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 SASS6Q6UVJ0 657 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 COLGALT2Q8IYK4 626 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 NOC3LQ8WTT2 800 aaKnown RBP25.65■■□□□ 1.7
HOMER3-201ENST00000221222 FAM193BQ96PV7 902 aaPredicted RBP25.65■■□□□ 1.7
HOMER3-201ENST00000221222 TMEM175Q9BSA9 504 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 CERS4Q9HA82 394 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 SLC38A7Q9NVC3 462 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 DACH1Q9UI36 760 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 CTNND2Q9UQB3 1225 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 DERAQ9Y315 318 aa25.65■■□□□ 1.7
HOMER3-201ENST00000221222 CARNS1A5YM72 827 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 MAPK13O15264 365 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 LETM1O95202 739 aaPredicted RBP25.64■■□□□ 1.69
HOMER3-201ENST00000221222 FKBP3Q00688 224 aaKnown RBP25.64■■□□□ 1.69
HOMER3-201ENST00000221222 TUSC3Q13454 348 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 ZBTB6Q15916 424 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 CT47A1Q5JQC4 288 aaPredicted RBP25.64■■□□□ 1.69
HOMER3-201ENST00000221222 MICALL1Q8N3F8 863 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 FAM212AQ96EL1 285 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 AAASQ9NRG9 546 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 DNAJB4Q9UDY4 337 aa25.64■■□□□ 1.69
HOMER3-201ENST00000221222 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.64■■□□□ 1.69
HOMER3-201ENST00000221222 ZC3H11AO75152 810 aaKnown RBP eCLIP25.63■■□□□ 1.69
HOMER3-201ENST00000221222 BMPR1AP36894 532 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 CASP4P49662 377 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 SPOUT1Q5T280 376 aaKnown RBP25.63■■□□□ 1.69
HOMER3-201ENST00000221222 SPRED2Q7Z698 418 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 NT5DC4Q86YG4 428 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 COLGALT1Q8NBJ5 622 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 RDH13Q8NBN7 331 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 MFSD14AQ96MC6 490 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 DUSP9Q99956 384 aaKnown RBP25.63■■□□□ 1.69
HOMER3-201ENST00000221222 C17orf80Q9BSJ5 609 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 PLVAPQ9BX97 442 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 RWDD2AQ9UIY3 292 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 FRMD4BQ9Y2L6 1034 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 C2CD2Q9Y426 696 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 VCANP13611 3396 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 TTC28Q96AY4 2481 aa25.63■■□□□ 1.69
HOMER3-201ENST00000221222 C5orf67F2Z3F1 127 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 RFXAPO00287 272 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 CETN3O15182 167 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 WNT7BP56706 349 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 BCAR1P56945 870 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 CYP24A1Q07973 514 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 PSMD6Q15008 389 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 SURF1Q15526 300 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 CEP135Q66GS9 1140 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 JADE1Q6IE81 842 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 KCNT2Q6UVM3 1135 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 KIF12Q96FN5 646 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 ZNF558Q96NG5 402 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 MKNK1Q9BUB5 465 aa25.62■■□□□ 1.69
HOMER3-201ENST00000221222 UBQLN1Q9UMX0 589 aaKnown RBP25.62■■□□□ 1.69
HOMER3-201ENST00000221222 AKAP3O75969 853 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 RB1P06400 928 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 GALTP07902 379 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 CYP3A5P20815 502 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 ERCC5P28715 1186 aaPredicted RBP25.61■■□□□ 1.69
HOMER3-201ENST00000221222 ALDH7A1P49419 539 aaKnown RBP25.61■■□□□ 1.69
HOMER3-201ENST00000221222 SPAG1Q07617 926 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 STX1AQ16623 288 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 EPC2Q52LR7 807 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 PDE11AQ9HCR9 933 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 ANO10Q9NW15 660 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 PCDHB12Q9Y5F1 795 aa25.61■■□□□ 1.69
HOMER3-201ENST00000221222 XPOTO43592 962 aaKnown RBP25.6■■□□□ 1.69
HOMER3-201ENST00000221222 NFICP08651 508 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 CTNNB1P35222 781 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 PSMC2P35998 433 aaKnown RBP25.6■■□□□ 1.69
HOMER3-201ENST00000221222 SLC11A1P49279 550 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 STX17P56962 302 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 SOX4Q06945 474 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-201ENST00000221222 TMEM132DQ14C87 1099 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 EFCAB13Q8IY85 973 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 C18orf25Q96B23 403 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-201ENST00000221222 CEP63Q96MT8 703 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 UROC1Q96N76 676 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 MED15Q96RN5 788 aa25.6■■□□□ 1.69
HOMER3-201ENST00000221222 SLC16A3O15427 465 aaKnown RBP25.59■■□□□ 1.69
HOMER3-201ENST00000221222 ALDH2P05091 517 aa25.59■■□□□ 1.69
HOMER3-201ENST00000221222 PPM1AP35813 382 aa25.59■■□□□ 1.69
HOMER3-201ENST00000221222 TYRO3Q06418 890 aa25.59■■□□□ 1.69
HOMER3-201ENST00000221222 SPATA1Q5VX52 437 aa25.59■■□□□ 1.69
HOMER3-201ENST00000221222 SLC39A11Q8N1S5 342 aa25.59■■□□□ 1.69
HOMER3-201ENST00000221222 GZF1Q9H116 711 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-201ENST00000221222 NRP1O14786 923 aa25.58■■□□□ 1.69
HOMER3-201ENST00000221222 PBX3P40426 434 aa25.58■■□□□ 1.69
HOMER3-201ENST00000221222 MCCD1P59942 119 aaPredicted RBP25.58■■□□□ 1.69
HOMER3-201ENST00000221222 ENPEPQ07075 957 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms