RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 GTPBP10A4D1E9 387 aaKnown RBP18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TSGA10IPQ3SY00 556 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TAGAPQ8N103 731 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 AGAP3Q96P47 875 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 C7orf25Q9BPX7 421 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 XPO7Q9UIA9 1087 aaKnown RBP18.82■□□□□ 0.6
EXTL3-201ENST00000220562 ZNF609O15014 1411 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 C18orf8Q96DM3 657 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 HLA-DPA1P20036 260 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 RFWD2Q8NHY2 731 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 TMEM117Q9H0C3 514 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 TRPC7Q9HCX4 862 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 MAD2L2Q9UI95 211 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 AURKCQ9UQB9 309 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 TNS3Q68CZ2 1445 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 HSD17B4P51659 736 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 SLC18A3Q16572 532 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 ASAP3Q8TDY4 903 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 USP33Q8TEY7 942 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 WWP1Q9H0M0 922 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 ELP3Q9H9T3 547 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
EXTL3-201ENST00000220562 FLT1P17948 1338 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 POLRMTO00411 1230 aaKnown RBP18.81■□□□□ 0.6
EXTL3-201ENST00000220562 FDX1P10109 184 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 SRGNP10124 158 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 ATICP31939 592 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 CHN1P15882 459 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 HIC1Q14526 733 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 KCNV1Q6PIU1 500 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 ELMO2Q96JJ3 720 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.81■□□□□ 0.6
EXTL3-201ENST00000220562 TRIM10Q9UDY6 481 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 FAM95CA0A1B0GW59 222 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 ZSCAN9O15535 394 aaPredicted RBP18.81■□□□□ 0.6
EXTL3-201ENST00000220562 COPB2P35606 906 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 KCNF1Q9H3M0 494 aa18.81■□□□□ 0.6
EXTL3-201ENST00000220562 FMO5P49326 533 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 KDSRQ06136 332 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
EXTL3-201ENST00000220562 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 SFMBT1Q9UHJ3 866 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 IL10P22301 178 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 PGM1P36871 562 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.8■□□□□ 0.6
EXTL3-201ENST00000220562 MORC2Q9Y6X9 1032 aaPredicted RBP18.8■□□□□ 0.6
EXTL3-201ENST00000220562 IQGAP3Q86VI3 1631 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
EXTL3-201ENST00000220562 TLR2O60603 784 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 GFAPP14136 432 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 ACTR2P61160 394 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 ADSSL1Q8N142 457 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 SEC24DO94855 1032 aaPredicted RBP18.8■□□□□ 0.6
EXTL3-201ENST00000220562 GALCP54803 685 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 NFIXQ14938 502 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 VEPH1Q14D04 833 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 MTHFD1LQ6UB35 978 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 NPHS2Q9NP85 383 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 AGPAT5Q9NUQ2 364 aa18.8■□□□□ 0.6
EXTL3-201ENST00000220562 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 KCNQ2O43526 872 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 AGTP01019 485 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 ZNF543Q08ER8 600 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 PDAP1Q13442 181 aaKnown RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 DYRK4Q9NR20 520 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 TRAF3IP3Q9Y228 551 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 MDH1P40925 334 aaKnown RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 IRX2Q9BZI1 471 aaPredicted RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 KDM4CQ9H3R0 1056 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 MED14O60244 1454 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 TMEM132DQ14C87 1099 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 OR9Q1Q8NGQ5 310 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 CCSER1Q9C0I3 900 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 SNX9Q9Y5X1 595 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 ITIH6Q6UXX5 1313 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 MEFVO15553 781 aaPredicted RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 DDX50Q9BQ39 737 aaKnown RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 CCDC78A2IDD5 438 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 ZNF189O75820 626 aaPredicted RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 HOXD10P28358 340 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 HDAC4P56524 1084 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 SNRNP35Q16560 246 aaKnown RBP18.79■□□□□ 0.6
EXTL3-201ENST00000220562 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 DCUN1D1Q96GG9 259 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 DAGLAQ9Y4D2 1042 aa18.79■□□□□ 0.6
EXTL3-201ENST00000220562 RAD51Q06609 339 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 EPN3Q9H201 632 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 PITPNM2Q9BZ72 1349 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 APRTP07741 180 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 NCOA4Q13772 614 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 COBLL1Q53SF7 1204 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 SMIM5Q71RC9 77 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 KLC4Q9NSK0 619 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ANGPT2O15123 496 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 HMBSP08397 361 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms