RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 LCMT1Q9UIC8 334 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 LCA5LO95447 670 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 CHN1P15882 459 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 BACE1P56817 501 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 ATP11AP98196 1134 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 ACAD10Q6JQN1 1059 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 KDM7AQ6ZMT4 941 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 GZMAP12544 262 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 FBXW10Q5XX13 1052 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 ITGB4P16144 1822 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 RBAK-RBAKDNI3L0D1 243 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MCF2LO15068 1137 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MED7O43513 233 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 ATP9AO75110 1047 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 CALB1P05937 261 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MYBL1P10243 752 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 HSPA9P38646 679 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 PTENP60484 403 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 MTM1Q13496 603 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 SURF1Q15526 300 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 LRRC71Q8N4P6 559 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 PYROXD1Q8WU10 500 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 TMBIM4Q9HC24 238 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 COX16Q9P0S2 106 aa13.14□□□□□ -0.31
TM9SF4-201ENST00000217315 CALCAP01258 141 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 WEE2P0C1S8 567 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 RALAP11233 206 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 CORO7P57737 925 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 PARVAQ9NVD7 372 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■■ 39.6
TM9SF4-201ENST00000217315 IP6K2Q9UHH9 426 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 EXTL3O43909 919 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 CAND2O75155 1236 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM107AO95990 144 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 GPC3P51654 580 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 SNX16P57768 344 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 PPP2R5DQ14738 602 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 CENPUQ71F23 418 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 TBC1D1Q86TI0 1168 aaPredicted RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 LENG9Q96B70 501 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM167AQ96KS9 214 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 C17orf75Q9HAS0 396 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 GGT7Q9UJ14 662 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 NDC80O14777 642 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 PYGMP11217 842 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 SLC1A1P43005 524 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 MAP7D3Q8IWC1 876 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM149B1Q96BN6 582 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 ACTR5Q9H9F9 607 aaPredicted RBP13.13□□□□□ -0.31
TM9SF4-201ENST00000217315 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 JAG1P78504 1218 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 CYP24A1Q07973 514 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 PDIK1LQ8N165 341 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 VWA5AO00534 786 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 PRKCBP05771 671 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 INHBAP08476 426 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms