RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ADCYAP1R1P41586 468 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 PER3P56645 1201 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 PROK1P58294 105 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 CCT2P78371 535 aaKnown RBP3.89□□□□□ -1.79
CDKN3-201ENST00000216414 CDK17Q00537 523 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 TCEA2Q15560 299 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 GPR162Q16538 588 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 CYP2A13Q16696 494 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 MST1LQ2TV78 715 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 AFMIDQ63HM1 303 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 FKBP9P1Q75LS8 142 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 C1QL2Q7Z5L3 287 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 THNSL2Q86YJ6 484 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 SYNPOQ8N3V7 929 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 OR7D4Q8NG98 312 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 OR2W6PQ8NHA6 318 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 EAF2Q96CJ1 260 aaPredicted RBP3.89□□□□□ -1.79
CDKN3-201ENST00000216414 UROC1Q96N76 676 aa3.89□□□□□ -1.79
CDKN3-201ENST00000216414 UNKLQ9H9P5 680 aaKnown RBP3.89□□□□□ -1.79
CDKN3-201ENST00000216414 ARPP21Q9UBL0 812 aaPredicted RBP3.89□□□□□ -1.79
CDKN3-201ENST00000216414 PEX1O43933 1283 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 ALOX15P16050 662 aaPredicted RBP3.88□□□□□ -1.79
CDKN3-201ENST00000216414 ATP5JP18859 108 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 GCSHP23434 173 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 SLC6A2P23975 617 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 ECHS1P30084 290 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 VAV2P52735 878 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 SP140Q13342 867 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 UGT8Q16880 541 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 COLGALT2Q8IYK4 626 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 AHI1Q8N157 1196 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 SSH3Q8TE77 659 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 RIN2Q8WYP3 895 aaPredicted RBP3.88□□□□□ -1.79
CDKN3-201ENST00000216414 DDB2Q92466 427 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 SLC5A5Q92911 643 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 C1QTNF7Q9BXJ2 289 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 CPNE5Q9HCH3 593 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 EMC7Q9NPA0 242 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 MOCS1Q9NZB8 636 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 DPP7Q9UHL4 492 aa3.88□□□□□ -1.79
CDKN3-201ENST00000216414 WNT10BO00744 389 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 ORC4O43929 436 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 PRSS23O95084 383 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 HOXB6P17509 224 aaKnown RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 EXOSC10Q01780 885 aaKnown RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 UBXN2BQ14CS0 331 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 ZNF529Q6P280 563 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 Q6ZVL8 140 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 GRASPQ7Z6J2 395 aaPredicted RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 RASSF3Q86WH2 238 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 PPM1KQ8N3J5 372 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 C9orf106Q8NAJ2 232 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 GPR156Q8NFN8 814 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 STON2Q8WXE9 905 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 NINJ1Q92982 152 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 TARS2Q9BW92 718 aaKnown RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 SENP6Q9GZR1 1112 aaPredicted RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 ZSWIM4Q9H7M6 989 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 BCO1Q9HAY6 547 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 ZNF70Q9UC06 446 aaPredicted RBP3.87□□□□□ -1.79
CDKN3-201ENST00000216414 SIK3Q9Y2K2 1263 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 ATRNL1Q5VV63 1379 aa3.87□□□□□ -1.79
CDKN3-201ENST00000216414 TRGV11A0A075B6L2 103 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 MANSC4A6NHS7 340 aaPredicted RBP3.86□□□□□ -1.79
CDKN3-201ENST00000216414 IL2RBP14784 551 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 GPD1P21695 349 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 ALDH1A3P47895 512 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 PDCD1Q15116 288 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 SF3B3Q15393 1217 aaKnown RBP3.86□□□□□ -1.79
CDKN3-201ENST00000216414 SRSF7Q16629 238 aaKnown RBP eCLIP3.86□□□□□ -1.79
CDKN3-201ENST00000216414 GEN1Q17RS7 908 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.86□□□□□ -1.79
CDKN3-201ENST00000216414 TSTD2Q5T7W7 516 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 FAM180AQ6UWF9 173 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 PTF1AQ7RTS3 328 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 DHX37Q8IY37 1157 aaKnown RBP3.86□□□□□ -1.79
CDKN3-201ENST00000216414 NIM1KQ8IY84 436 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 PQLC1Q8N2U9 271 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 LNX2Q8N448 690 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 LDAHQ9H6V9 325 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 FBXO34Q9NWN3 711 aa3.86□□□□□ -1.79
CDKN3-201ENST00000216414 ZFPL1O95159 310 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 CKBP12277 381 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 SREBF1P36956 1147 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 FOLR3P41439 243 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
CDKN3-201ENST00000216414 EZH2Q15910 746 aaKnown RBP3.85□□□□□ -1.79
CDKN3-201ENST00000216414 TKFCQ3LXA3 575 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 ATP13A4Q4VNC1 1196 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 UBE3BQ7Z3V4 1068 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 HOMER1Q86YM7 354 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
CDKN3-201ENST00000216414 MARS2Q96GW9 593 aaKnown RBP3.85□□□□□ -1.79
CDKN3-201ENST00000216414 RAX2Q96IS3 184 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 FEZ1Q99689 392 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 LANCL2Q9NS86 450 aa3.85□□□□□ -1.79
CDKN3-201ENST00000216414 WIPF3A6NGB9 483 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 YY2O15391 372 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 MAPK10P53779 464 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms