RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Acap3Q6NXL5 833 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Arhgef26D3YYY8 869 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Tcof1O08784 1320 aaKnown RBP19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Snx12O70493 165 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Gsta3P30115 221 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Nxf7Q80SZ6 620 aaKnown RBP19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Slfn2Q9Z0I6 378 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Sucla2Q9Z2I9 463 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Gm2832F7AEC7 200 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Adam2Q60718 735 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Fam107aQ78TU8 144 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Rusc1Q8BG26 893 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ddx19bQ8BZY3 494 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ttc33Q9D6K7 262 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Eif2s3xQ9Z0N1 472 aaKnown RBP19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Eif2s3yQ9Z0N2 472 aa19.24■□□□□ 0.67
Trim71-201ENSMUST00000111816 Zfp804bA0A0G2JGH6 1343 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ttll3A4Q9E5 927 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Skint11A7XV14 364 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Rin3P59729 980 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Fam178bQ24JP3 464 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 XpaQ64267 272 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Sh3tc2Q80VA5 1289 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Catsper4Q8BVN3 442 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Arhgef3Q91X46 524 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Iqcf1Q9D9K8 182 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Pdcd11Q6NS46 1862 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Scgb2b21A0A087WQA9 112 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Mapkapk2P49138 386 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Myl2P51667 166 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Tmod3Q9JHJ0 352 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ppp2r3cQ9JK24 453 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Top2bQ64511 1612 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ms4a14A0A087WSD2 1232 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Lrrc32G3XA59 663 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Btbd3P58545 530 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Adrbk2Q3UYH7 688 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Wdsub1Q9D0I6 474 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Gm8298J3QPI0 401 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 SfnO70456 248 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Nup62Q63850 526 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Usf2Q64705 346 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Sema3dQ8BH34 777 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 RalbQ9JIW9 206 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 FliiQ9JJ28 1271 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Vwa3bJ9JI28 736 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Guca1aP43081 202 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Man1a1P45700 655 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Galnt18Q8K1B9 622 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Zfp655Q9CZP3 541 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Q9D9D9 101 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Mtnd3P03899 115 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Usp10P52479 792 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 ThemisQ8BGW0 636 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Anxa9Q9JHQ0 345 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Glt1d1A4FUP9 346 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Kpna4O35343 521 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Cyp11b1Q3TG86 501 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 EmsyQ8BMB0 1264 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Morc2bQ8C5W4 1022 aa19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Mtif2Q91YJ5 727 aaKnown RBP19.23■□□□□ 0.67
Trim71-201ENSMUST00000111816 Arhgef12Q8R4H2 1543 aaKnown RBP19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Chil3O35744 398 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Aldh3a2P47740 484 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ccz1Q8C1Y8 480 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Vmn1r213Q8R278 384 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Kdm4bQ91VY5 1086 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Skint5A7XUY5 1461 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Oas1fQ14AZ4 364 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Slc44a1Q6X893 653 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 BC005561E9Q5E2 1589 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Trappc3O55013 180 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Thoc7Q7TMY4 204 aaKnown RBP19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 GaleQ8R059 347 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Dnajc28Q8VCE1 385 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Clic4Q9QYB1 253 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 AqrQ8CFQ3 1481 aaKnown RBP19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Wdr7Q920I9 1489 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 CalcaP70160 136 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Itih2Q61703 946 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Ddx3yQ62095 658 aaKnown RBP19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Rps6kb2Q9Z1M4 485 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Mug1P28665 1476 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 SntnQ8C9X1 147 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Plcl2Q8K394 1128 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Emilin1Q99K41 1017 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Snrnp35Q9D384 244 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Slxl1Q9D515 155 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Cyp4f40G3UW81 524 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Rb1P13405 921 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Mfn1Q811U4 741 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Tnfrsf21Q9EPU5 655 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Scgb2b20Q9JI02 112 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Capn7Q9R1S8 813 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Rexo5D3YW29 759 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Vmn2r38G3UYA8 861 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Vmn2r33K7N705 861 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Vmn2r44L7N2E1 861 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 Cadps2Q8BYR5 1297 aa19.22■□□□□ 0.67
Trim71-201ENSMUST00000111816 TsnQ62348 228 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms