RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 RalaP63321 206 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Trim43bP86448 445 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 GabpaQ00422 454 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pdlim7Q3TJD7 457 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rmdn3Q3UJU9 470 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Spdye4aQ5IBH6 268 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tfap2bQ61313 459 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tgoln2Q62314 363 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gpd2Q64521 727 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zswim6Q80TB7 1207 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Elmo3Q8BYZ7 720 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Dclre1bQ8C7W7 541 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Slc18a1Q8R090 521 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Hdac9Q99N13 588 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Npm3Q9CPP0 175 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fgfr1op2Q9CRA9 253 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 GrapQ9CX99 217 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Serpinb3bQ9D1Q5 387 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rab11fip1Q9D620 645 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tmx2Q9D710 295 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Mpp2Q9WV34 552 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Snx1Q9WV80 522 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Prss51A0A286YDY8 319 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Slfn8B1ARD8 910 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Taf4bG5E8Z2 855 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 PorP37040 678 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 NsfP46460 744 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rhox5P52651 210 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cops2P61202 443 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rufy4Q3TYX8 563 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cnga4Q3UW12 575 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 CbarpQ66L44 698 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rassf6Q80UQ2 353 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ipo5Q8BKC5 1097 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ppm1kQ8BXN7 372 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Scrn2Q8VCA8 425 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gpihbp1Q9D1N2 228 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tmem79Q9D709 391 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rilpl1Q9JJC6 406 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Snx3O70492 162 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Serpina1eQ00898 413 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Klra7Q60654 280 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zbtb17Q60821 794 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sec23ipQ6NZC7 998 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Adat2Q6P6J0 191 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 RbakQ8BQC8 711 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Camkk2Q8C078 588 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 HibchQ8QZS1 385 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Igf2bp3Q9CPN8 579 aaKnown RBP13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ankef1Q9D2J7 775 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 PrameQ9D4Z5 464 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cyp39a1Q9JKJ9 470 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Txnrd2Q9JLT4 524 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Golgb1E9PVZ8 3238 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Xbp1O35426 267 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Atp9aO70228 1047 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sar1aP36536 198 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sash1P59808 1230 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gspt2Q149F3 632 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Stxbp2Q64324 593 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Q6DFW0 481 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Klhl29Q80T74 875 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tmem39bQ810L4 492 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Atg4cQ811C2 458 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 PreplQ8C167 725 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fam118bQ8C569 351 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Inpp5fQ8CDA1 1132 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Caskin2Q8VHK1 1201 aa13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Chchd3Q9CRB9 227 aaKnown RBP13.73□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tex13c2A0A0G2JGA3 530 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Spata31d1dE9Q5W2 1247 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm1661E9Q963 441 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm21962L7N280 338 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Vmn2r15L7N2A0 855 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Slc10a4Q3UEZ8 437 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fam81aQ3UXZ6 364 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Phc1Q64028 1012 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cyp3a11Q64459 504 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zfp341Q6PGC9 846 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Nsun6Q7TS68 476 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 PhkbQ7TSH2 1085 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 MogsQ80UM7 834 aaKnown RBP13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ccdc50Q810U5 305 aaKnown RBP13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rhot1Q8BG51 631 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pak4Q8BTW9 593 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sugp2Q8CH09 1067 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 AdigQ8R400 80 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pdk2Q9JK42 407 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Prmt2Q9R144 448 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pdcd7Q9WTY1 482 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Wdr95D3Z7A8 784 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Per1O35973 1291 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Birc5O70201 140 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Nptx2O70340 429 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gbp1Q01514 589 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Trim72Q1XH17 477 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 SpoplQ2M2N2 392 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pid1Q3UBG2 217 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Nlrp4eQ66X19 978 aa13.72□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rnf139Q7TMV1 668 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms