RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Rpf1Q7TND5 349 aaKnown RBP13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 MogsQ80UM7 834 aaKnown RBP13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Fgd5Q80UZ0 1219 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Arhgap11aQ80Y19 987 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Nol12Q8BG17 217 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 E2f4Q8R0K9 410 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Olfr458Q8VF80 313 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Olfr457Q8VGP5 313 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Pcdhb19Q91Y01 801 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Asb7Q91ZU0 318 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 RnmtQ9D0L8 465 aaKnown RBP13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Q9D5Q8 446 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ascl3Q9JJR7 174 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Cpsf3Q9QXK7 684 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Wdr54Q9R0D8 334 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 GsdmeQ9Z2D3 512 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Vps13aQ5H8C4 3166 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Plxna3P70208 1872 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Adamts20P59511 1906 aa13.31□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Apol7aB2RT54 418 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Zscan25B2RX31 543 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 4930444G20RikD3Z741 495 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Casq1O09165 405 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Aldh1a7O35945 501 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tpd52l1O54818 204 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 PdgfbP31240 241 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gdf6P43028 454 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ndufs6P52503 116 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ptcd3Q14C51 685 aaKnown RBP13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 UrgcpQ5NCI0 926 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Sycp1Q62209 993 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Slc39a10Q6P5F6 833 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 PdgfrlQ6PE55 375 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Naa35Q6PHQ8 725 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Olfr119Q7TRJ5 321 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Zscan4cQ80VJ6 506 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Igdcc3Q8BQC3 813 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 DpydQ8CHR6 1025 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tm4sf5Q91XF2 196 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Wrnip1Q91XU0 660 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ackr4Q924I3 350 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Them5Q9CQJ0 248 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ankef1Q9D2J7 775 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tmem86aQ9D8N3 241 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Dmrtc1Q9D9R7 182 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Zfyve19Q9DAZ9 389 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tpcn1Q9EQJ0 817 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Myl7Q9QVP4 175 aa13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Chd7A2AJK6 2986 aaKnown RBP13.3□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gm13276A0A087WR18 182 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gm45015A0A140LII9 184 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gm18336A0A140LIU8 765 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Klhdc7aA2APT9 773 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tgfbr3lD3YZZ2 297 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Acad12D3Z7X0 555 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Angpt1O08538 498 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Epb41l2O70318 988 aaKnown RBP13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Brcc3P46737 291 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Fut7Q11131 389 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Cyp2c66Q5GLZ0 490 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Cd6Q61003 665 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Krt14Q61781 484 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Nlrp14Q6B966 993 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 TbckQ8BM85 762 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Q8C4P0 716 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Rpp40Q8R1F9 363 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Cyp4f13Q99N19 523 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Rpl17Q9CPR4 184 aaKnown RBP13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ccer1Q9CQL2 403 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gins2Q9D600 185 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 2310002L09RikQ9D7L5 217 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 TsaccQ9DA44 124 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gabbr1Q9WV18 960 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Cd97Q9Z0M6 818 aa13.29□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gm10134F6ZQC6 126 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Vmn2r19G5E8G4 854 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Oaz2O08608 189 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Aff1O88573 1216 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 IapP03975 557 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Zfp1P08042 402 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ca8P28651 291 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 AdssP46664 456 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 PtpaP58389 323 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 CkbQ04447 381 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Tnfaip8l3Q3TBL6 204 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Znf354cQ571J5 560 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Pex1Q5BL07 1284 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Prmt8Q6PAK3 394 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Herc4Q6PAV2 1057 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Paqr9Q6TCG2 375 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Trnau1apQ80VC6 287 aaKnown RBP13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Lin9Q8C735 542 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Trim9Q8C7M3 817 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ccdc150Q8CDI7 1110 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Ago2Q8CJG0 860 aaKnown RBP13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Mtmr3Q8K296 1196 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Q922C1 641 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Gadd45gip1Q9CR59 222 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Snx10Q9CWT3 201 aa13.28□□□□□ -0.28
Ccdc28b-202ENSMUST00000106035 Pin4Q9CWW6 131 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms