RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Casq2O09161 415 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 PrkceP16054 737 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 HiraQ61666 1015 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Clec4gQ8BNX1 294 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Usp38Q8BW70 1042 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 SowahdQ8BY98 327 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Trim47Q8C0E3 641 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cyp2c50Q91X77 490 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Rnf31Q924T7 1066 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Sept12Q9D451 317 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Nudt5Q9JKX6 218 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Trpv2Q9WTR1 756 aa10.56□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Mms22lB1AUR6 1238 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 E2f6O54917 272 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Hmx1O70218 332 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Vars2Q3U2A8 1060 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ptk6Q64434 451 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Fbxo10Q7TQF2 950 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Phf20Q8BLG0 1010 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Q8K2W9 541 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Vmn1r214Q8R279 367 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Nol6Q8R5K4 1152 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Mtmr6Q8VE11 617 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ddx47Q9CWX9 455 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Kcnh7Q9ER47 1195 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Slc22a3Q9WTW5 551 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Abca6Q8K441 1624 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Gm13084A2A8N0 494 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Kif6E9PX57 802 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 PdgfraP26618 1089 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tubgcp3P58854 905 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Pacsin1Q61644 441 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 TdrkhQ80VL1 560 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Amz1Q8BVF9 502 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 PreplQ8C167 725 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Pnma3Q8JZW8 466 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ddx56Q9D0R4 546 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Klhl41A2AUC9 606 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Gm10250G3X9L6 160 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cap1P40124 474 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tmprss11aQ3UQ41 389 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cnot7Q60809 285 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 FntaQ61239 377 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Szrd1Q6NXN1 152 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Wdr91Q7TMQ7 748 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tmem39bQ810L4 492 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Q8BGN9 141 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Olfr395Q8VGR3 312 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Slc44a4Q91VA1 707 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Emc2Q9CRD2 297 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tube1Q9D6T1 475 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 PpihQ9D868 188 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Atp5hQ9DCX2 161 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cdc42ep4Q9JM96 349 aaKnown RBP10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cep170bQ80U49 1574 aa10.55□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cdr2lA2A6T1 465 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 4930444G20RikD3Z741 495 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 GclmO09172 274 aaKnown RBP10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Adam7O35227 789 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 MafgO54790 162 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Xirp1O70373 1129 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Aff1O88573 1216 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tll1Q62381 1013 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Grm4Q68EF4 912 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Chmp2bQ8BJF9 213 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 WdpcpQ8C456 722 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Xpo6Q924Z6 1125 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Zswim7Q9CWQ2 152 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Smyd3Q9CWR2 428 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cuedc2Q9CXX9 284 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Cmtr1Q9DBC3 837 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ap2b1Q9DBG3 937 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ddx39bQ9Z1N5 428 aaKnown RBP10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Adamts13Q769J6 1426 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Trappc3O55013 180 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Krt1P04104 637 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Fcer2P20693 331 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Rps6P62754 249 aaKnown RBP10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Rbm46P86049 533 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tdrd5Q5VCS6 1040 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 CtifQ6PEE2 600 aaKnown RBP10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Gm7247Q6UY52 187 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Abraxas1Q8BPZ8 407 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Fkbp6Q91XW8 327 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Fam49bQ921M7 324 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Fgfr1op2Q9CRA9 253 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Nudt12Q9DCN1 462 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 SynrgQ5SV85 1306 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Zfp212G3X8R7 492 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Msx3P70354 204 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ppp4cP97470 307 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Klra5Q60652 266 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ephx4Q6IE26 359 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Dnph1Q80VJ3 173 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Tlk1Q8C0V0 766 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Ifi205aQ8CGE8 404 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 TwnkQ8CIW5 685 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Stap2Q8R0L1 411 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Pglyrp2Q8VCS0 530 aa10.54□□□□□ -0.72
Smarca1-202ENSMUST00000088973 Nr3c2Q8VII8 978 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms