RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Trmt13Q8BYH3 481 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Terb1Q8C0V1 768 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Exd1Q8CDF7 570 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Atg14Q8CDJ3 492 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Adprhl2Q8CG72 370 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cdk17Q8K0D0 523 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kiaa0319lQ8K135 1048 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Il31raQ8K5B1 716 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Q8R1Y2 203 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Olfr356Q8VFP5 315 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NpntQ91V88 561 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hdac11Q91WA3 347 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Q9D1F3 157 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Akap8Q9DBR0 687 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Angptl2Q9R045 493 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mad1l1Q9WTX8 717 aaKnown RBP9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Extl3Q9WVL6 918 aa9.71□□□□□ -0.85
Upf3b-201ENSMUST00000076265 TnikP83510 1323 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ltbp1Q8CG19 1712 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Scgb1b15A0A087WP50 93 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CN725425A0A087WRU1 652 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm16430A6X8J1 155 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Skint6A7XUZ6 1240 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Arhgap36B1AUC7 590 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Clca3bE9PUL3 1044 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm7233E9PZI8 198 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm9732F6QVC4 198 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm5798F7BTS7 198 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm2056J3QQ02 144 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Eif6O55135 245 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gdap1O88741 358 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tuba3aP05214 450 aaKnown RBP9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Eef1dP57776 281 aaKnown RBP9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tbx1P70323 479 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc20a1Q61609 681 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ttyh3Q6P5F7 524 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Haus7Q8BKT8 364 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mettl6Q8BVH9 282 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sall4Q8BX22 1067 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam83aQ8K2P2 436 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pex12Q8VC48 359 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr1047Q8VGS0 319 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Krt23Q99PS0 422 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tmed5Q9CXE7 229 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tmem39aQ9CYC3 486 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Anks3Q9CZK6 655 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Chaf1bQ9D0N7 572 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cul2Q9D4H8 745 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ttc33Q9D6K7 262 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc13a1Q9JHI4 594 aa9.71□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm5580A0A0N4SVP8 411 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr1432A0A140LHS7 346 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ttc39aA2ACP1 578 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Proca1B0QZF7 307 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TroapB7ZNG4 668 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fbxl18E9PYR1 771 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm5799E9Q2M1 201 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rgs9O54828 675 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Alox12P39655 663 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Hsdl2Q2TPA8 490 aaKnown RBP9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Acsm3Q3UNX5 580 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lrrcc1Q69ZB0 1026 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 D3Ertd751eQ8BGN2 192 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Scara5Q8K299 491 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr98Q8VFD9 309 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr97Q8VFE1 310 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr617Q8VGA1 318 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sh3d19Q91X43 789 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ppp4r3bQ922R5 820 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 BrapQ99MP8 591 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam69aQ9D6I7 428 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 AuhQ9JLZ3 314 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Eif2ak3Q9Z2B5 1114 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Plekhg4A0A1L1SU27 1217 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tpm3-rs7D3Z2H9 248 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stat5aP42230 793 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Hnf4aP49698 474 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pdrg1P59048 133 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ptchd3Q0EEE2 906 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CrtamQ149L7 389 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 SkilQ60665 675 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ppp1r14bQ62084 147 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sp8Q8BMJ8 486 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Trim68Q8K243 485 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rbm19Q8R3C6 952 aaKnown RBP9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lrrc2Q8VDB8 371 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Srgap1Q91Z69 1062 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sh2b1Q91ZM2 756 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ska1Q9CPV1 254 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Six6os1Q9CTN5 574 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Bbs2Q9CWF6 721 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Q9D9S1 216 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dnajc10Q9DC23 793 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Hmg20bQ9Z104 317 aa9.7□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gbp6A0A0G2JDV3 611 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Zbed6D2EAC2 980 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm43302L7N1X8 611 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Enpp1P06802 906 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Irf1P15314 329 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cyr61P18406 379 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms