RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Paxbp1P58501 919 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gjb6P70689 261 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rnpc3Q3UZ01 514 aaKnown RBP13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 FancbQ5XJY6 703 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Ddx3yQ62095 658 aaKnown RBP13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 HomezQ80W88 542 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Pnma2Q8BHK0 365 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Scrn2Q8VCA8 425 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Cacng4Q9JJV4 327 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Uchl3Q9JKB1 230 aa13.99□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tbkbp1A2A9T0 611 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Vmn2r121A2BE32 847 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Kcnj4P52189 445 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Pafah1b1P63005 410 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Vamp7P70280 220 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Sparcl1P70663 650 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Taf2Q8C176 1104 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Alas1Q8VC19 642 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Olfr385Q8VGT1 312 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 VasnQ9CZT5 673 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Mrpl2Q9D773 306 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Xrn2Q9DBR1 951 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Kiaa0100Q5SYL3 2234 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Zscan4-ps3A0A1B0GRH6 506 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Zscan4-ps2A0A1C7CYU6 506 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Ttc13A0A1L1SSC7 844 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Ankrd16A2AS55 361 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tatdn2B7ZNL9 783 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Cdk14O35495 469 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Hoxc8P09025 242 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Nap1l1P28656 391 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 VwdeQ6DFV8 926 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Jade1Q6ZPI0 834 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tor4aQ8BH02 426 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Serpina3bQ8BYY9 420 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rnf34Q99KR6 376 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Lrrc71Q9D3W5 558 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rpf2Q9JJ80 306 aaKnown RBP13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rfx5Q9JL61 658 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Znf394Q9Z1D9 521 aa13.98□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Card6E9PWH2 1175 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rnf113a2Q14B01 337 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gm5935Q497S0 212 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Nucks1Q80XU3 234 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gprc5aQ8BHL4 356 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Fam133bQ9CVI2 245 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tubgcp4Q9D4F8 667 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Wdr46Q9Z0H1 622 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 SktA2AQ25 1946 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Plekhg4A0A1L1SU27 1217 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Atp2c2A7L9Z8 944 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Samd1D3YXK1 519 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tulp2P46686 562 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Shmt1P50431 478 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gpr156Q6PCP7 798 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Wscd1Q80XH4 572 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 ClmnQ8C5W0 1052 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Setd3Q91WC0 594 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Pcdhgb4Q91XX6 912 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Srgap2Q91Z67 1071 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Luc7lQ9CYI4 371 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Acsl3Q9CZW4 720 aaKnown RBP13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Fkbp1bQ9Z2I2 108 aa13.97□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 2210011C24RikA0A087WQ89 206 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Trim12cD3Z3L3 497 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 4933406M09RikG3XA12 479 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Prdx5P99029 210 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Grm2Q14BI2 872 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Crhr2Q60748 411 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Fhod1Q6P9Q4 1197 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gucy2gQ6TL19 1100 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Tmem220Q8BP07 167 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Otud6bQ8K2H2 294 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Dusp19Q8K4T5 220 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Asb7Q91ZU0 318 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Asb11Q9CQ31 323 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Pdk2Q9JK42 407 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Ptpn3A2ALK8 913 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Gm4788E9Q8B5 879 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 H2afzP0C0S6 128 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Xrcc5P27641 732 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Scp2P32020 547 aaKnown RBP13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Capza3P70190 299 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 H2afvQ3THW5 128 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Rmdn3Q3UJU9 470 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Hspa4Q61316 841 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Armcx2Q6A058 784 aaKnown RBP13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Snx19Q6P4T1 997 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Spata20Q80YT5 790 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Iqcb1Q8BP00 598 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Cypt1Q8CH20 168 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Cyp2d26Q8CIM7 500 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Itgbl1Q8VDV0 494 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Ttc1Q91Z38 292 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Lrrc57Q9D1G5 239 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Dnajc12Q9R022 198 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 EmcnQ9R0H2 261 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Arih2Q9Z1K6 492 aa13.96□□□□□ -0.17
Ccdc71-201ENSMUST00000061209 Aoc3O70423 765 aa13.96□□□□□ -0.18
Ccdc71-201ENSMUST00000061209 Casp14O89094 257 aa13.96□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms