RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Retreg1dQ8VE91 480 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Zc3h7bF8VPP8 982 aaKnown RBP16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Psma2P49722 234 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Dync1li2Q6PDL0 492 aaKnown RBP16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 N4bp3Q8C7U1 537 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Pcdhb7Q8CDY9 829 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Xpo6Q924Z6 1125 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Anxa13Q99JG3 317 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 CenpkQ9ESN5 271 aa16.46■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm3371F7CQW8 167 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 9130409I23RikQ3TS87 320 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Fam193bQ3U2K0 892 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 ItgaeQ60677 1167 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 FcgrtQ61559 365 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Xpo7Q9EPK7 1087 aa16.46■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Zfp277E9Q6D6 583 aaKnown RBP16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Pou6f1Q07916 301 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 McuQ3UMR5 350 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Fam102aQ78T81 392 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 PrcpQ7TMR0 491 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Slc8a2Q8K596 921 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tbc1d22aQ8R5A6 516 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ciao1Q99KN2 339 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Msh2P43247 935 aaKnown RBP16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Edem3Q2HXL6 931 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Churc1Q6DG52 112 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Usp17leQ7M764 540 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Apol9bQ8C7I4 310 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Rmnd1Q8CI78 450 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Apol9aQ8VDU3 310 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Idh3bQ91VA7 384 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Dync1li1Q8R1Q8 523 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ccdc59Q8R2N0 240 aaKnown RBP16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 NcaldQ91X97 193 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Abce1P61222 599 aaKnown RBP16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tspyl5Q69ZB3 406 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tdpoz4Q6YCH2 370 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Dna2Q6ZQJ5 1062 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm21972J3QN38 98 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Cyp2j6O54750 501 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 D1Pas1P16381 660 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Adck2Q6NSR3 617 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 GmipQ6PGG2 971 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Trim65Q8BFW4 522 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ces1dQ8VCT4 565 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Rassf7Q9DD19 359 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Usp29Q9ES63 869 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm8237E9Q257 205 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tmem165P52875 323 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Arf4P61750 180 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Slc13a5Q67BT3 572 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Terb1Q8C0V1 768 aa16.45■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Olfr1123A2AT85 323 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Q6DFW0 481 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Hdac10Q6P3E7 666 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Actl9Q8CG27 415 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Trmt44Q9D2Q2 713 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Arl6ip4Q9JM93 229 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 6030498E09RikB1AX85 169 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm1141B9EJU1 475 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ceacam5Q3UKK2 947 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Odr4Q4PJX1 447 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Xlr3cQ61806 226 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Rbmx2Q8R0F5 326 aaKnown RBP16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ndufb9Q9CQJ8 179 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 EtfbQ9DCW4 255 aaKnown RBP16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Pold3Q9EQ28 462 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 CdylQ9WTK2 593 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm28036V9GXJ1 658 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Mucl2P02815 138 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Kpnb1P70168 876 aaKnown RBP16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Kiaa2013Q91X21 634 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Aff4Q9ESC8 1160 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 NesQ6P5H2 1864 aaKnown RBP16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Sco1Q5SUC9 284 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Oca2Q62052 833 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Rundc3bQ6PDC0 408 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Atp6v0d2Q80SY3 350 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Defb15Q8R2I5 79 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Nol6Q8R5K4 1152 aaKnown RBP16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Znf496Q5SXI5 585 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tmem134Q8R0J4 195 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Dpp3Q99KK7 738 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tceal6Q9DB24 200 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ets2P15037 468 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ip6k2Q80V72 448 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Castor1Q9CWQ8 331 aa16.44■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm3424L7N298 263 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gm8246M0QWX9 263 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Sik2Q8CFH6 931 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Tph2Q8CGV2 488 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ccdc137Q8R0K4 290 aaKnown RBP16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Nmd3Q99L48 503 aaKnown RBP16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ddx28Q9CWT6 540 aaKnown RBP16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 PigbQ9JJQ0 542 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Abcc12Q80WJ6 1366 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Gnat1P20612 350 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Alppl2P24823 529 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Ncoa4Q5U4H9 625 aa16.43■□□□□ 0.22
Ubr3-201ENSMUST00000055758 Fam107aQ78TU8 144 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms