RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Vmn2r55G3UWZ4 781 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vmn2r53L7N473 806 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kcnj4P52189 445 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vamp7P70280 220 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Upf3bQ3ULL6 472 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Krit1Q6S5J6 736 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Celf4Q7TSY6 486 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Polr2bQ8CFI7 1174 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp2d26Q8CIM7 500 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Taco1Q8K0Z7 294 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 NapgQ9CWZ7 312 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 PollQ9QXE2 573 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 PfkpQ9WUA3 784 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 LctF8VPT3 1931 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pex10B1AUE5 324 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 2610008E11RikG3X964 669 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Mroh9G5E8L9 891 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm13128L7MU96 475 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cyp27b1O35084 507 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kpna6O35345 536 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 StrnO55106 780 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 H2afzP0C0S6 128 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Xrcc5P27641 732 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 H2afvQ3THW5 128 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Uri1Q3TLD5 531 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Krt35Q497I4 455 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Xkr4Q5GH67 647 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ncapg2Q6DFV1 1138 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Podnl1Q6P3Y9 559 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Plekha4Q8VC98 588 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 AclyQ91V92 1091 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Prkag2Q91WG5 566 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 YarsQ91WQ3 528 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lman1Q9D0F3 517 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cacng4Q9JJV4 327 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Eif2ak3Q9Z2B5 1114 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Vmn2r121A2BE32 847 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3127E9Q9P5 263 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3453K7N724 263 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3164L7N2B9 238 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gm3264L7N2C5 238 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 PtgisO35074 501 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Aimp1P31230 310 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tcp11Q01755 566 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 SPINDOCQ05AH6 381 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 NeblQ0II04 452 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ice2Q3UZ18 988 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Hspa4Q61316 841 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Kiaa0754Q69ZZ9 979 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gpr156Q6PCP7 798 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Jade1Q6ZPI0 834 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 F13a1Q8BH61 732 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam155aQ8CCS2 467 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Scrn2Q8VCA8 425 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Setd3Q91WC0 594 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 GraspQ9JJA9 392 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ankrd2Q9WV06 328 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cd97Q9Z0M6 818 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ank3G5E8K5 1961 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrrc73B2RWC4 316 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tatdn2B7ZNL9 783 aaKnown RBP9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zfp358E9Q8M1 571 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 4933406M09RikG3XA12 479 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 E030030I06RikJ3QML9 246 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cdk14O35495 469 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Grm2Q14BI2 872 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ntan1Q64311 310 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tmco3Q8BH01 678 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Pnma2Q8BHK0 365 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Serpina3bQ8BYY9 420 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Taf2Q8C176 1104 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Dusp19Q8K4T5 220 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Olfr385Q8VGT1 312 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Smc1bQ920F6 1248 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Atp6ap2Q9CYN9 350 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Stx17Q9D0I4 301 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrrc57Q9D1G5 239 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Tubgcp4Q9D4F8 667 aa9.33□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttc13A0A1L1SSC7 844 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ttll8A4Q9F1 832 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Enc1O35709 589 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 CraddO88843 199 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Prdx5P99029 210 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Rnf113a2Q14B01 337 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Nhej1Q3KNJ2 295 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Gucy2gQ6TL19 1100 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam126bQ8C729 530 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrrc45Q8CIM1 670 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Cpa5Q8R4H4 436 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Fam76aQ922G2 307 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Zmat2Q9CPW7 199 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Asb11Q9CQ31 323 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Ctnnbl1Q9CWL8 563 aaKnown RBP9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrrc71Q9D3W5 558 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 EmcnQ9R0H2 261 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Nup210lQ9D2F7 1881 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 2210011C24RikA0A087WQ89 206 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Atp2c2A7L9Z8 944 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Slc6a20bO88575 635 aa9.32□□□□□ -0.92
Trim39-201ENSMUST00000042717 Lrrc4bP0C192 709 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms