RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Fam167aQ6P1G6 215 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nod1Q8BHB0 953 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pabpc6Q9D4E6 643 aaKnown RBP17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Dusp10Q9ESS0 483 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 HaspinQ9Z0R0 754 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Eif3eP60229 445 aaKnown RBP17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Psmc5P62196 406 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Morc2bQ8C5W4 1022 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vmn1r191Q8K4D0 298 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Thoc1Q8R3N6 657 aaKnown RBP17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 MydgfQ9CPT4 166 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 OoepQ9CWE6 164 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tubb1A2AQ07 451 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 E230025N22RikG5E8S3 482 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 KitP05532 979 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nr5a1P33242 462 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Hsd17b4P51660 735 aaKnown RBP17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 NpeppsQ11011 920 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Mapk13Q9Z1B7 366 aa17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kiaa0232Q80U59 1396 aaKnown RBP17.39■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ifi206G3UZV2 921 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Hspa9P38647 679 aaKnown RBP17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ccna1Q61456 421 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 NfkbizQ9EST8 728 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zcchc7B1AX39 541 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Anxa8O35640 327 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Oog4Q4G0C7 502 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fbxo9Q8BK06 437 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Vmn1r213Q8R278 384 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gins4Q99LZ3 223 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Setd4P58467 439 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ccdc127Q3TC33 260 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gpc3Q8CFZ4 579 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Vps50Q8CI71 964 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim13Q9CYB0 407 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 2210016F16RikG3X8U3 338 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Rgs4O08899 205 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Idi1P58044 227 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ppp4r3cQ3V0Y1 813 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Slitrk2Q810C0 846 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dmap1Q9JI44 468 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gmeb1Q9JL60 562 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fam107aQ78TU8 144 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Znf618Q80YY7 953 aaKnown RBP17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ppm1nQ8BGL1 404 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gpsm2Q8VDU0 679 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pik3cgQ9JHG7 1102 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Uhrf1bp1B2KF50 1429 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Srp72F8VQC1 671 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 RargP18911 458 aaKnown RBP17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ankrd13aQ80UP5 588 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Afap1l1Q8BZI0 768 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Appl1Q8K3H0 707 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dync1li1Q8R1Q8 523 aa17.39■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Uhmk1P97343 419 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pcdh11xF6ZNL5 1338 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 1700024B05RikE9Q6D7 167 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Guca1aP43081 202 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Mxi1P50540 228 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gabpb1Q00420 383 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 LbrQ3U9G9 626 aaKnown RBP17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Spdye4aQ5IBH6 268 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Polr3fQ921X6 316 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Tmprss15P97435 1069 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pou6f1Q07916 301 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Eepd1Q3TGW2 569 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Rhox3fA2ANE1 215 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Sulf1Q8K007 870 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 OafQ8QZR4 282 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Psmd14O35593 310 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 VcpQ01853 806 aaKnown RBP17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Col15a1O35206 1367 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ttll10A4Q9F3 704 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cyp4f17G3UW78 524 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cyp4f16Q99N17 524 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pdk2Q9JK42 407 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 TdrkhQ80VL1 560 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 H2afy2Q8CCK0 372 aaKnown RBP17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Maged2Q9ER67 616 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm379J3QQ19 296 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Q66JV7 365 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Iars2Q8BIJ6 1012 aa17.38■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fam47eD3YWC7 402 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Akr1b7P21300 316 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Tfcp2l1Q3UNW5 479 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm5414Q6IFZ8 552 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ttc26Q8BS45 554 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dpp9Q8BVG4 862 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zbtb12Q9Z150 459 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dnajb6O54946 365 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zfp882E9Q4R4 555 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cfap52Q5F201 620 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Serpinb9bQ9DAV6 377 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 MeiocA2AG06 965 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 FancfE9Q5Z5 343 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Recql4Q75NR7 1216 aaKnown RBP17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cwf19l2Q8BG79 887 aaKnown RBP17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Mad2l2Q9D752 211 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ten1Q9D7K2 161 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Hsf3D0VYS2 492 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 711.5 ms