RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 TbckQ8BM85 762 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Smtnl2Q8CI12 456 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Nfs1Q9Z1J3 459 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc16a2O70324 545 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Camk4P08414 469 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Atp11aP98197 1187 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cog7Q3UM29 770 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Znf583Q3V080 568 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Syce2Q505B8 171 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sema5aQ62217 1077 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PolnQ7TQ07 864 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Lonp1Q8CGK3 949 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 RnpepQ8VCT3 650 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PtprvP70289 1705 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 DgkhD3YXJ0 1156 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sema6bO54951 886 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gnl1P36916 607 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kpnb1P70168 876 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Psg29Q3URN6 468 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 OgdhQ60597 1023 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Klra6Q60653 266 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Nuak1Q641K5 658 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pdik1lQ8QZR7 341 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Akr1c14Q91WT7 323 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Krt5Q922U2 580 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Asb11Q9CQ31 323 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Astn1Q61137 1302 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Scgb2b21A0A087WQA9 112 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tekt5G5E8A8 557 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cetn1P41209 172 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Togaram2Q3TYG6 1002 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ag2Q3UPL5 249 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cdc14aQ6GQT0 603 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Zic5Q7TQ40 622 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Phf20Q8BLG0 1010 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Spns2Q91VM4 549 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pomgnt1Q91X88 660 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 ChiaQ91XA9 473 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PrameQ9D4Z5 464 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Diaph3Q9Z207 1171 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 SpoplQ2M2N2 392 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 E2f8Q58FA4 860 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Six2Q62232 296 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gpr156Q6PCP7 798 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Trmt2aQ8BNV1 574 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Terb2Q9D494 218 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pabpc6Q9D4E6 643 aaKnown RBP11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cmtm5Q9D6G9 156 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ccdc22Q9JIG7 627 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gyg1Q9R062 333 aa11.98□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ebf2O08792 575 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Npy5rO70342 466 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc27a3O88561 667 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rnf25Q9QZR0 456 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Armc3A2AU72 881 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mocs3A2BDX3 460 aaKnown RBP11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 ArP19091 899 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pdcd2P46718 343 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Plk4Q64702 925 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rhot1Q8BG51 631 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Plcg2Q8CIH5 1265 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PpatQ8CIH9 517 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Coq6Q8R1S0 476 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Acot11Q8VHQ9 594 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ces1fQ91WU0 561 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Anapc7Q9WVM3 565 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Nwd2Q6P5U7 1742 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mrc1Q61830 1456 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PigrO70570 771 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Klra7Q60654 280 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Klra3Q64329 266 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tyw3Q8BSA9 257 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rassf9Q8K342 435 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Znf354bQ9QXT9 601 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 RptorQ8K4Q0 1335 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 EvplQ9D952 2035 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc6a16A0A1L1SR47 742 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rabgap1lA6H6A9 815 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ppp2r5aQ6PD03 486 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cyfip1Q7TMB8 1253 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Zswim6Q80TB7 1207 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sh3tc2Q80VA5 1289 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Btbd9Q8C726 612 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PhykplQ8R1K4 467 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Scrn2Q8VCA8 425 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Polr3cQ9D483 533 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Drg2Q9QXB9 364 aaKnown RBP11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tll2Q9WVM6 1012 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Myh4Q5SX39 1939 aa11.97□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kiaa1522A2A7S8 1013 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Zc3h7aE9PWW6 970 aaKnown RBP11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm20721E9Q2U8 318 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pex5O09012 639 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 P01734 135 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Vwa3aQ3UVV9 1148 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tubgcp5Q8BKN5 1024 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kat2aQ9JHD2 830 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sept6Q9R1T4 434 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slfn14V9GXG1 899 aa11.96□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Fyb2A2A995 729 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms