RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Vps4bP46467 444 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Rpusd2Q149F1 553 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Afap1l2Q5DTU0 825 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Itih1Q61702 907 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Gm7247Q6UY52 187 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Gpc5Q8CAL5 572 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Vmn1r214Q8R279 367 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tesk2Q8VCT9 570 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Thumpd2Q9CZB3 528 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Aldh1b1Q9CZS1 519 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Vps33aQ9D2N9 598 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 MrrfQ9D6S7 262 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Rhobtb1Q9DAK3 695 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Cdc42ep4Q9JM96 349 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 CtsfQ9R013 462 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Apobec2Q9WV35 224 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Krt16Q9Z2K1 469 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Zfand4D3Z3C6 739 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Gm3893E9Q1I1 302 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tmem132bF7BAB2 1078 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 PkmP52480 531 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Atl2Q6PA06 583 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Smg5Q6ZPY2 1017 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tmc4Q7TQ65 694 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Fam102bQ8BQS4 339 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tlk1Q8C0V0 766 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Trip10Q8CJ53 603 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Upb1Q8VC97 393 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Kbtbd12Q9D618 625 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Dkc1Q9ESX5 509 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 ErmapQ9JLN5 566 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 4930407I10RikD3Z5T8 1512 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 FscbA1EGX6 1074 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Dhx35A2ACQ1 703 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ess2O70279 479 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 AgtP11859 477 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Msr1P30204 458 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Gprin1Q3UNH4 932 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Capn13Q3UW68 665 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tdrd5Q5VCS6 1040 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Hif1aQ61221 836 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 FntaQ61239 377 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Chi3l1Q61362 389 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Gm2163Q6PCY5 473 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ipo5Q8BKC5 1097 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Kcns3Q8BQZ8 491 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Rccd1Q8BTU7 377 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tmem145Q8C4U2 746 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 A430089I19RikQ8C9W1 407 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Unc45bQ8CGY6 931 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Pnma3Q8JZW8 466 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ipo11Q8K2V6 975 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Stx19Q8R1Q0 292 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ing3Q8VEK6 421 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 IrgqQ8VIM9 583 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tti1Q91V83 1085 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Trub2Q91WG3 331 aaKnown RBP8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Pcdha11Q91Y19 950 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Znf654Q9DAU9 571 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 IkbipQ9DBZ1 373 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Nudt12Q9DCN1 462 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 CenpkQ9ESN5 271 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Cul3Q9JLV5 768 aa8.66□□□□□ -1.02
Trub1-201ENSMUST00000026072 Arhgap33Q80YF9 1305 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Slc4a9E9PUP3 929 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Kcna2P63141 499 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Klra9Q2TJJ8 266 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Q3TQQ9 903 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Dennd2cQ6P9P8 914 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Smarca1Q6PGB8 1046 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tdpoz2Q717B2 364 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Fbxo10Q7TQF2 950 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Snrnp27Q8K194 155 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Znrd1-asQ8R0E5 213 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ccdc137Q8R0K4 290 aaKnown RBP8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Sf3b3Q921M3 1217 aaKnown RBP8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Nme5Q99MH5 211 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 ArhgdiaQ99PT1 204 aaKnown RBP8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Zswim7Q9CWQ2 152 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Scyl3Q9DBQ7 735 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Rnf103Q9R1W3 683 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ppef2O35385 757 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Sptlc1O35704 473 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Impdh2P24547 514 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ifnar1P33896 590 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Nfe2Q07279 373 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Tmem120bQ3TA38 339 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Nlrp4eQ66X19 978 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Ccnt2Q7TQK0 723 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Arhgap15Q811M1 481 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Snip1Q8BIZ6 383 aaKnown RBP8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Pde10aQ8CA95 790 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Zcchc18Q8VD24 393 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Mrpl2Q9D773 306 aaKnown RBP8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 ParvaQ9EPC1 372 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Pard6bQ9JK83 371 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Prg3Q9JL95 222 aa8.65□□□□□ -1.02
Trub1-201ENSMUST00000026072 Nlrp1bA1Z198 1177 aa8.65□□□□□ -1.03
Trub1-201ENSMUST00000026072 Supt3B0QZW4 406 aa8.65□□□□□ -1.03
Trub1-201ENSMUST00000026072 Gm10250G3X9L6 160 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms