RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W XYL2Q07993 356 aa3.35□□□□□ -1.87
SPT6YGR116W YPR064WQ12492 139 aa3.35□□□□□ -1.87
SPT6YGR116W AI1P03875 834 aa3.35□□□□□ -1.87
SPT6YGR116W TRR1P29509 319 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W YOR062CP36025 268 aa3.35□□□□□ -1.87
SPT6YGR116W GMH1P36125 273 aa3.35□□□□□ -1.87
SPT6YGR116W HSP10P38910 106 aa3.35□□□□□ -1.87
SPT6YGR116W NEO1P40527 1151 aa3.35□□□□□ -1.87
SPT6YGR116W SLS1P42900 643 aa3.35□□□□□ -1.87
SPT6YGR116W RAD17P48581 401 aa3.35□□□□□ -1.87
SPT6YGR116W EST3Q03096 181 aa3.35□□□□□ -1.87
SPT6YGR116W ADD37Q03233 198 aa3.35□□□□□ -1.87
SPT6YGR116W RUB1Q03919 77 aa3.35□□□□□ -1.87
SPT6YGR116W NMA1Q06178 401 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W BDS1Q08347 646 aa3.35□□□□□ -1.87
SPT6YGR116W YPR014CQ6B0W2 109 aa3.35□□□□□ -1.87
SPT6YGR116W DET1Q99288 334 aaKnown RBP3.35□□□□□ -1.87
SPT6YGR116W CBS1P14066 229 aa3.34□□□□□ -1.87
SPT6YGR116W SAC7P17121 654 aa3.34□□□□□ -1.87
SPT6YGR116W KKQ8P36004 724 aa3.34□□□□□ -1.87
SPT6YGR116W IML3P38265 245 aa3.34□□□□□ -1.87
SPT6YGR116W YEA4P40004 342 aa3.34□□□□□ -1.87
SPT6YGR116W GET2P40056 285 aa3.34□□□□□ -1.87
SPT6YGR116W YGR012WP53206 393 aa3.34□□□□□ -1.87
SPT6YGR116W BNA5Q05979 453 aa3.34□□□□□ -1.87
SPT6YGR116W RTK1Q12100 620 aaPredicted RBP3.34□□□□□ -1.87
SPT6YGR116W IZH2Q12442 317 aa3.34□□□□□ -1.87
SPT6YGR116W MTF1P14908 341 aaKnown RBP3.34□□□□□ -1.87
SPT6YGR116W MAK32P23060 363 aa3.34□□□□□ -1.87
SPT6YGR116W GLN1P32288 370 aaKnown RBP3.34□□□□□ -1.87
SPT6YGR116W MOT2P34909 587 aaKnown RBP3.34□□□□□ -1.87
SPT6YGR116W FAT1P38225 669 aa3.34□□□□□ -1.87
SPT6YGR116W YMR262WP38430 313 aa3.34□□□□□ -1.87
SPT6YGR116W WSS1P38838 269 aa3.34□□□□□ -1.87
SPT6YGR116W YEA6P39953 335 aa3.34□□□□□ -1.87
SPT6YGR116W PAU5P43575 122 aa3.34□□□□□ -1.87
SPT6YGR116W CSL4P53859 292 aaPredicted RBP3.34□□□□□ -1.87
SPT6YGR116W YVH1Q02256 364 aaKnown RBP3.34□□□□□ -1.87
SPT6YGR116W THI74Q04083 370 aa3.34□□□□□ -1.87
SPT6YGR116W FRQ1Q06389 190 aa3.34□□□□□ -1.87
SPT6YGR116W YDL211CQ12121 372 aa3.34□□□□□ -1.87
SPT6YGR116W AGC1Q12482 902 aa3.34□□□□□ -1.87
SPT6YGR116W RPS21BQ3E754 87 aaKnown RBP3.34□□□□□ -1.87
SPT6YGR116W GDH1P07262 454 aaKnown RBP3.34□□□□□ -1.88
SPT6YGR116W MATALPHA1P0CY06 175 aa3.34□□□□□ -1.88
SPT6YGR116W HMLALPHA1P0CY07 175 aa3.34□□□□□ -1.88
SPT6YGR116W LSB5P25369 354 aa3.34□□□□□ -1.88
SPT6YGR116W YIL161WP40449 235 aaKnown RBP3.34□□□□□ -1.88
SPT6YGR116W PMT3P47190 753 aa3.34□□□□□ -1.88
SPT6YGR116W TVP18Q04767 167 aa3.34□□□□□ -1.88
SPT6YGR116W PIN3Q06449 215 aa3.34□□□□□ -1.88
SPT6YGR116W MSB2P32334 1306 aa3.33□□□□□ -1.88
SPT6YGR116W SCEIP03882 235 aa3.33□□□□□ -1.88
SPT6YGR116W HNM1P19807 563 aa3.33□□□□□ -1.88
SPT6YGR116W PET18P25362 215 aa3.33□□□□□ -1.88
SPT6YGR116W AFG1P32317 509 aa3.33□□□□□ -1.88
SPT6YGR116W ERG3P32353 365 aa3.33□□□□□ -1.88
SPT6YGR116W FMT1P32785 401 aa3.33□□□□□ -1.88
SPT6YGR116W IRS4P36115 615 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W TIM17P39515 158 aa3.33□□□□□ -1.88
SPT6YGR116W RRD1P40454 393 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W BXI1P48558 297 aa3.33□□□□□ -1.88
SPT6YGR116W NPY1P53164 384 aa3.33□□□□□ -1.88
SPT6YGR116W VPS62P53285 467 aa3.33□□□□□ -1.88
SPT6YGR116W YLR152CP54072 576 aa3.33□□□□□ -1.88
SPT6YGR116W GIC2Q06648 383 aa3.33□□□□□ -1.88
SPT6YGR116W SRL2Q12020 392 aa3.33□□□□□ -1.88
SPT6YGR116W FCY22Q12119 530 aa3.33□□□□□ -1.88
SPT6YGR116W YCT1Q12235 531 aa3.33□□□□□ -1.88
SPT6YGR116W DFR1P07807 211 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SPT6YGR116W TCA17P32613 152 aa3.33□□□□□ -1.88
SPT6YGR116W MDL1P33310 695 aa3.33□□□□□ -1.88
SPT6YGR116W OMA1P36163 345 aa3.33□□□□□ -1.88
SPT6YGR116W ECM34P38728 170 aa3.33□□□□□ -1.88
SPT6YGR116W YER010CP40011 234 aa3.33□□□□□ -1.88
SPT6YGR116W YIL060WP40519 144 aa3.33□□□□□ -1.88
SPT6YGR116W GPP1P41277 250 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W APS2Q00381 147 aa3.33□□□□□ -1.88
SPT6YGR116W SYM1Q06563 197 aa3.33□□□□□ -1.88
SPT6YGR116W CTR3Q06686 241 aa3.33□□□□□ -1.88
SPT6YGR116W AKR2Q12013 749 aa3.33□□□□□ -1.88
SPT6YGR116W YOR015WQ12169 119 aa3.33□□□□□ -1.88
SPT6YGR116W ORT1Q12375 292 aa3.33□□□□□ -1.88
SPT6YGR116W RIP1P08067 215 aa3.33□□□□□ -1.88
SPT6YGR116W PRE1P22141 198 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W YCR100CP25606 316 aa3.33□□□□□ -1.88
SPT6YGR116W MGM101P32787 269 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W PHS1P40857 217 aa3.33□□□□□ -1.88
SPT6YGR116W AZF1P41696 914 aa3.33□□□□□ -1.88
SPT6YGR116W ACS2P52910 683 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W ALG12P53730 551 aa3.33□□□□□ -1.88
SPT6YGR116W ALG9P53868 555 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W PAL1Q05518 499 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W MRPL51Q06090 140 aaPredicted RBP3.33□□□□□ -1.88
SPT6YGR116W YDR262WQ12331 272 aa3.33□□□□□ -1.88
SPT6YGR116W TMA7Q3E764 64 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W HTB1P02293 131 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W HTB2P02294 131 aa3.33□□□□□ -1.88
SPT6YGR116W FUR4P05316 633 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W ARF2P19146 181 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms