RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	YLR146W-A	Q2V2P1	62 aa		5	□□□□□ -1.61
VCX1	YDL128W	YIL134C-A	Q45U18	67 aa		5	□□□□□ -1.61
VCX1	YDL128W	YPR014C	Q6B0W2	109 aa		5	□□□□□ -1.61
VCX1	YDL128W	PNO1	Q99216	274 aa	Known RBP	5	□□□□□ -1.61
VCX1	YDL128W	MEX67	Q99257	599 aa	Known RBP	5	□□□□□ -1.61
VCX1	YDL128W	CCH1	P50077	2039 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	CHO1	P08456	276 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	ATP5	P09457	212 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	SCL1	P21243	252 aa	Known RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	SEC62	P21825	274 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	LAC1	P28496	418 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
VCX1	YDL128W	SEF1	P34228	1148 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	OAR1	P35731	278 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	MRPL27	P36526	146 aa	Predicted RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	SYS1	P41544	203 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	RPA34	P47006	233 aa	Predicted RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	COX16	P47081	118 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	NIF3	P53081	288 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	YGL204C	P53089	101 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	YGR012W	P53206	393 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	SLX9	P53251	210 aa	Predicted RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	SMX3	P54999	86 aa	Predicted RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	TMA23	Q03525	211 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	YDR415C	Q04033	374 aa	Predicted RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	HEM25	Q07534	307 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	YLR118C	Q12354	227 aa		4.99	□□□□□ -1.61
VCX1	YDL128W	AIM45	Q12480	344 aa	Known RBP	4.99	□□□□□ -1.61
VCX1	YDL128W	CPA1	P07258	411 aa	Known RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	CKA1	P15790	372 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	CPR4	P25334	318 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	GEX1	P25596	615 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	EHD3	P28817	500 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	DCG1	P32460	244 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	GEX2	P36173	615 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	MRPL11	P36521	249 aa	Predicted RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	HMT1	P38074	348 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	MAL32	P38158	584 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	DLS1	P40366	167 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	YIL089W	P40500	205 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	YIL060W	P40519	144 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	GLC8	P41818	229 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	MOB2	P43563	287 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	UBC9	P50623	157 aa	Predicted RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	NSA1	P53136	463 aa	Predicted RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	MAL12	P53341	584 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	SAE3	P89114	91 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	CTF19	Q02732	369 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	CWC27	Q02770	301 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	PIR1	Q03178	341 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	ATC1	Q04005	294 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	AVO2	Q04749	426 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	YMR310C	Q04867	317 aa	Predicted RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	REX4	Q08237	289 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	YOR365C	Q08844	703 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.98	□□□□□ -1.61
VCX1	YDL128W	YNR034W-A	Q3E841	98 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	ODC2	Q99297	307 aa		4.98	□□□□□ -1.61
VCX1	YDL128W	STE7	P06784	515 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	SGA1	P08019	549 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	RPL31A	P0C2H8	113 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	RPL31B	P0C2H9	113 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	MTF1	P14908	341 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	MCK1	P21965	375 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	KRR1	P25586	316 aa	Predicted RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	DEG1	P31115	442 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	FMT1	P32785	401 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	ECM15	P35195	104 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	MRPS9	P38120	278 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	FAT1	P38225	669 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	POP7	P38291	140 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	SDS24	P38314	527 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	TRS20	P38334	175 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	YPT35	P38815	214 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	CHS7	P38843	316 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	GGC1	P38988	300 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	NOP16	P40007	231 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	GAT2	P40209	560 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	AVT7	P40501	490 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	APQ12	P40532	138 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	AZF1	P41696	914 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	SFH5	P47008	294 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	UBP8	P50102	471 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	UFD1	P53044	361 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	YGL262W	P53054	175 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	NPY1	P53164	384 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	BUD25	P85052	153 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	MRP51	Q02950	344 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	CTL1	Q03220	320 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	ADD37	Q03233	198 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	RTT103	Q05543	409 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	BNA5	Q05979	453 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	YLR456W	Q06199	204 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	TAZ1	Q06510	381 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	CTR3	Q06686	241 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	AIM6	Q07716	390 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	YOR387C	Q08910	206 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	FDH1	Q08911	376 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	AKR2	Q12013	749 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	SRO7	Q12038	1033 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms