RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MGRN1O60291 552 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ATP9AO75110 1047 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 IVDP26440 423 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 MAP2K2P36507 400 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ELF3P78545 371 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ALCAMQ13740 583 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 FAM133BQ5BKY9 247 aaKnown RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 KRT39Q6A163 491 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 MFSD5Q6N075 450 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 HIBCHQ6NVY1 386 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 RHBDF2Q6PJF5 856 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ANKS4BQ8N8V4 417 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 SCLT1Q96NL6 688 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 CCPG1Q9ULG6 757 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 SLC12A4Q9UP95 1085 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 AGAP1Q9UPQ3 857 aa14.8□□□□□ -0.04
PHGDH-233ENST00000642021 ASTN2O75129 1339 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-233ENST00000642021 PMM2O15305 246 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 CNGA1P29973 690 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SOX10P56693 466 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 CALCOCO2Q13137 446 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ITIH4Q14624 930 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SGO2Q562F6 1265 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 FAM102BQ5T8I3 360 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 CLEC4DQ8WXI8 215 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ARHGEF2Q92974 986 aaKnown RBP14.79□□□□□ -0.04
PHGDH-233ENST00000642021 TAOK3Q9H2K8 898 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SAMD15Q9P1V8 674 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 UVRAGQ9P2Y5 699 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 MAPK13O15264 365 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 NCKAP1LP55160 1127 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SATB1Q01826 763 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 MPP2Q14168 576 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 PREPLQ4J6C6 727 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ACAD10Q6JQN1 1059 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 VSTM1Q6UX27 236 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 TRPM8Q7Z2W7 1104 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ST6GALNAC4Q9H4F1 302 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 COQ4Q9Y3A0 265 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 O00370 1275 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SNX3O60493 162 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 CAP2P40123 477 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 PTGER2P43116 358 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 KYNUQ16719 465 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 WLSQ5T9L3 541 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 DEFB129Q9H1M3 183 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 ANAPC7Q9UJX3 599 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 TBX20Q9UMR3 447 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 R3HDM2Q9Y2K5 976 aaKnown RBP14.79□□□□□ -0.04
PHGDH-233ENST00000642021 UBIAD1Q9Y5Z9 338 aa14.79□□□□□ -0.04
PHGDH-233ENST00000642021 TMEM120BA0PK00 339 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 RDXP35241 583 aaKnown RBP14.78□□□□□ -0.04
PHGDH-233ENST00000642021 PDE6CP51160 858 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 GPC3P51654 580 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 E2F5Q15329 346 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 SLC39A4Q6P5W5 647 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 SV2AQ7L0J3 742 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 TRMT10CQ7L0Y3 403 aaKnown RBP14.78□□□□□ -0.04
PHGDH-233ENST00000642021 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 RUNDC3BQ96NL0 473 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 FAM118BQ9BPY3 351 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 ROPN1BQ9BZX4 212 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-233ENST00000642021 TMEM39BQ9GZU3 492 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 ROPN1Q9HAT0 212 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-233ENST00000642021 FGFR1OP2Q9NVK5 253 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 RAB20Q9NX57 234 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 TCP11X1B4DZS4 312 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 GH1P01241 217 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 NPTX2P47972 431 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 VPS41P49754 854 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 DGKZQ13574 1117 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 MTMR1Q13613 665 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 TAOK1Q7L7X3 1001 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 CROCCP2Q86T23 111 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 FAM160B2Q86V87 743 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 CYP4X1Q8N118 509 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 BSNDQ8WZ55 320 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 SLCO2A1Q92959 643 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 TMEM8AQ9HCN3 771 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 WHRNQ9P202 907 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 ZNF70Q9UC06 446 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-233ENST00000642021 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 CNTNAP1P78357 1384 aa14.78□□□□□ -0.04
PHGDH-233ENST00000642021 PLA2G6O60733 806 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 LYPLA2O95372 231 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 CCNE2O96020 404 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 ICAM1P05362 532 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.04
PHGDH-233ENST00000642021 SCP2P22307 547 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 MAPK4P31152 587 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 ITGA8P53708 1063 aa14.77□□□□□ -0.04
PHGDH-233ENST00000642021 MCCD1P59942 119 aaPredicted RBP14.77□□□□□ -0.04
PHGDH-233ENST00000642021 CLEC16AQ2KHT3 1053 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms