RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ACTN2P35609 894 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 FLT3P36888 993 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 CUL1Q13616 776 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 SULF1Q8IWU6 871 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 FAM76AQ8TAV0 307 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
PHGDH-229ENST00000641891 DPH5Q9H2P9 285 aa18.22■□□□□ 0.51
PHGDH-229ENST00000641891 ADARB2Q9NS39 739 aaKnown RBP18.22■□□□□ 0.51
PHGDH-229ENST00000641891 TTLL13PA6NNM8 815 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 OPA1O60313 960 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 MTA2O94776 668 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 VNN1O95497 513 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 GGPS1O95749 300 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 C4BPAP04003 597 aaKnown RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 PGK2P07205 417 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 HARSP12081 509 aaKnown RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 PIK3CAP42336 1068 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 CLDN10P78369 228 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 GCNT1Q02742 428 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 CAPSQ13938 189 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 TARBP2Q15633 366 aaKnown RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 ZSCAN26Q16670 478 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 ZACNQ401N2 412 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 SCARA3Q6AZY7 606 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 CCDC26Q8TAB7 109 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 TRIM31Q9BZY9 425 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 RBAKQ9NYW8 714 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 A0A0G2JLL6 359 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 ARIH2O95376 493 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 TCF7P36402 384 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 HSPA9P38646 679 aaKnown RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 STAT5BP51692 787 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 PTENP60484 403 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 BIRC3Q13489 604 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 CLEC16AQ2KHT3 1053 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 ACAD10Q6JQN1 1059 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 PRRT2Q7Z6L0 340 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 SH2D3CQ8N5H7 860 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 MSTO1Q9BUK6 570 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-229ENST00000641891 KIAA1586Q9HCI6 787 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 TXNRD2Q9NNW7 524 aa18.21■□□□□ 0.51
PHGDH-229ENST00000641891 PIGRP01833 764 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 MARK3P27448 753 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 PEX5P50542 639 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 PHLDB2Q86SQ0 1253 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 TRIM50Q86XT4 487 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 CD101Q93033 1021 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 APOBEC3GQ9HC16 384 aaKnown RBP18.2■□□□□ 0.5
PHGDH-229ENST00000641891 GTF3C4Q9UKN8 822 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 MIF4GDA9UHW6 222 aaKnown RBP18.2■□□□□ 0.5
PHGDH-229ENST00000641891 ZC3H11AO75152 810 aaKnown RBP eCLIP18.2■□□□□ 0.5
PHGDH-229ENST00000641891 ENPEPQ07075 957 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 DNAJC21Q5F1R6 531 aaKnown RBP18.2■□□□□ 0.5
PHGDH-229ENST00000641891 KCTD16Q68DU8 428 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 GLG1Q92896 1179 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 RPS6KC1Q96S38 1066 aa18.2■□□□□ 0.5
PHGDH-229ENST00000641891 CNOT8Q9UFF9 292 aaKnown RBP18.2■□□□□ 0.5
PHGDH-229ENST00000641891 A0A0B4J269 797 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 PYGMP11217 842 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 SSTR3P32745 418 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-229ENST00000641891 ABCD1P33897 745 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 PPFIA1Q13136 1202 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-229ENST00000641891 C2CD6Q53TS8 623 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 LLGL2Q6P1M3 1020 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 ENOSF1Q7L5Y1 443 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 EIF1ADQ8N9N8 165 aaKnown RBP18.19■□□□□ 0.5
PHGDH-229ENST00000641891 ATP8B4Q8TF62 1192 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 CPA5Q8WXQ8 436 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 FGD4Q96M96 766 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 PLAAQ9Y263 795 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 UMODL1Q5DID0 1318 aa18.19■□□□□ 0.5
PHGDH-229ENST00000641891 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 SOCS7O14512 581 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 SPOPO43791 374 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 HSD17B3P37058 310 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 RFC5P40937 340 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 IREB2P48200 963 aaKnown RBP18.18■□□□□ 0.5
PHGDH-229ENST00000641891 DR1Q01658 176 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 NEDD9Q14511 834 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 OR5B17Q8NGF7 314 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 SEC14L1Q92503 715 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 C18orf8Q96DM3 657 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 NAP1L3Q99457 506 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-229ENST00000641891 TRIM7Q9C029 511 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 NRBP2Q9NSY0 501 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 RNF181Q9P0P0 153 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 UTP11Q9Y3A2 253 aaKnown RBP18.18■□□□□ 0.5
PHGDH-229ENST00000641891 ADGRA2Q96PE1 1338 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 GOLGA6L10A0A0M3HER8 536 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 CFHP08603 1231 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 UNGP13051 313 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms