RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 LRWD1Q9UFC0 647 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CEP131Q9UPN4 1083 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SMG5Q9UPR3 1016 aaKnown RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 NUMBLQ9Y6R0 609 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CACNA1EQ15878 2313 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 CEP192Q8TEP8 1941 aa8.21□□□□□ -1.1
PHGDH-225ENST00000641720 ABCA7Q8IZY2 2146 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 TSC2P49815 1807 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 CCDC195A0A1B0GUA6 201 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 SPTLC2O15270 562 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 MAGEB2O15479 319 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 KINO60870 393 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 SLITRK3O94933 977 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 C1RP00736 705 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 ZSCAN20P17040 1043 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 TARSP26639 723 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 HOXA11P31270 313 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 CCT6AP40227 531 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 QARSP47897 775 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 PSMC5P62195 406 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 GPC5P78333 572 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 KRT85P78386 507 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 DCLRE1AQ6PJP8 1040 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 KCNK18Q7Z418 384 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 CATSPER3Q86XQ3 398 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 CKAP2LQ8IYA6 745 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 METTL13Q8N6R0 699 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 ZNF579Q8NAF0 562 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 SNX29Q8TEQ0 813 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 EPSTI1Q96J88 318 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 PNMA5Q96PV4 448 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 RTKNQ9BST9 563 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 OSBPL6Q9BZF3 934 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 NT5C3AQ9H0P0 336 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 IFT122Q9HBG6 1241 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 CHST12Q9NRB3 414 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 MIOSQ9NXC5 875 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 PCDHGA2Q9Y5H1 932 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 SRPRBQ9Y5M8 271 aaKnown RBP8.2□□□□□ -1.1
PHGDH-225ENST00000641720 TCHHQ07283 1943 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 PLXND1Q9Y4D7 1925 aa8.2□□□□□ -1.1
PHGDH-225ENST00000641720 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 A0A087WZ62 844 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 A0A087X0B3 334 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 NRG2O14511 850 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 NRP1O14786 923 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 TM4SF5O14894 197 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 LYPLA2O95372 231 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 KLRC2P26717 231 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 RPA1P27694 616 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 GBP2P32456 591 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 LONP1P36776 959 aaKnown RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 ME1P48163 572 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 NPEPPSP55786 919 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 DSG1Q02413 1049 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 PDIA5Q14554 519 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 KARSQ15046 597 aaKnown RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 LONRF3Q496Y0 759 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 MTERF2Q49AM1 385 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 TMEM119Q4V9L6 283 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 XKR3Q5GH77 459 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 ATL3Q6DD88 541 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 SHC4Q6S5L8 630 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 PARM1Q6UWI2 310 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 C4orf19Q8IY42 314 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 GSTCDQ8NEC7 633 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 ERMNQ8TAM6 284 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 PIGOQ8TEQ8 1089 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 HDAC7Q8WUI4 952 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 FAM167AQ96KS9 214 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 FDXACB1Q9BRP7 624 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 TMEM175Q9BSA9 504 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 POLR3CQ9BUI4 534 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-225ENST00000641720 RAB34Q9BZG1 259 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 ZSWIM4Q9H7M6 989 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 MINDY3Q9H8M7 445 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 TUFT1Q9NNX1 390 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 AGPAT5Q9NUQ2 364 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 DACT1Q9NYF0 836 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 RCOR1Q9UKL0 485 aa8.19□□□□□ -1.1
PHGDH-225ENST00000641720 PCDHA7Q9UN72 937 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms