RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 SCAF8Q9UPN6 1271 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 FDX1P10109 184 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ABCE1P61221 599 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 SGSM1Q2NKQ1 1148 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PREPLQ4J6C6 727 aaPredicted RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 C4orf22Q6V702 233 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ANKS1AQ92625 1134 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RNF103-CHMP3A0A140T963 221 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PYGBP11216 843 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 STMN1P16949 149 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 CA4P22748 312 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ARL4AP40617 200 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 CACNB3P54284 484 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 GPSM2P81274 684 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RARS2Q5T160 578 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 SWSAP1Q6NVH7 229 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ZC3H18Q86VM9 953 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 CREG2Q8IUH2 290 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 TMCO5AQ8N6Q1 288 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PPM1NQ8N819 430 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 DNAAF3Q8N9W5 541 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 FAM149B1Q96BN6 582 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 C2orf40Q9H1Z8 148 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 NOD2Q9HC29 1040 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 DCTN4Q9UJW0 460 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 KIF21AQ7Z4S6 1674 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 USP17L10C9JJH3 530 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PPEF1O14829 653 aaPredicted RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 LPXNO60711 386 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 NTRK3Q16288 839 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 DNAL1Q4LDG9 190 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ZBTB41Q5SVQ8 909 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 KBTBD4Q9NVX7 518 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 NXF1Q9UBU9 619 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 USP31Q70CQ4 1352 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PALLDQ8WX93 1383 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RNF225M0QZC1 329 aaPredicted RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 COMTP21964 271 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RBP5P82980 135 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 SBK1Q52WX2 424 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 NUGGCQ68CJ6 796 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 GRAMD4Q6IC98 578 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 LRRC8BQ6P9F7 803 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RBM46Q8TBY0 533 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 SLC9A2Q9UBY0 812 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 CDY2AQ9Y6F7 541 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 CDY1Q9Y6F8 540 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RBM47A0AV96 593 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 TRIM49BA6NDI0 452 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 STK25O00506 426 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 CLDN3O15551 220 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PDHA1P08559 390 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 NQO1P15559 274 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 MAGEA4P43358 317 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ZNF200P98182 395 aaPredicted RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 CDC16Q13042 620 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 STX3Q13277 289 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 SLC29A2Q14542 456 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 TBCCQ15814 346 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 ZNF699Q32M78 642 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 RNF169Q8NCN4 708 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 PIGOQ8TEQ8 1089 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 AENQ8WTP8 325 aaKnown RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 UBN1Q9NPG3 1134 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.23□□□□□ -1.89
LPP-222ENST00000640853 SYNGAP1Q96PV0 1343 aa3.23□□□□□ -1.89
LPP-222ENST00000640853 TRAPPC3O43617 180 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 ACADSP16219 412 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 PPARGP37231 505 aaPredicted RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 DYNLT1P63172 113 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 CCNA1P78396 465 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 AMPD2Q01433 879 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 ZBTB33Q86T24 672 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 PATL1Q86TB9 770 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 ATP8B3O60423 1300 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 PNPLA7Q6ZV29 1317 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 RFX7Q2KHR2 1363 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 NUMA1Q14980 2115 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 CFAP69A5D8W1 941 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 HNRNPDLO14979 420 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 FSBPO95073 299 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 GCLMP48507 274 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 RWDD4Q6NW29 188 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 TAB3Q8N5C8 712 aaPredicted RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 KRT35Q92764 455 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 DCPSQ96C86 337 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 ANO3Q9BYT9 981 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 CHN1P15882 459 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 INPP1P49441 399 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 FXR2P51116 673 aaKnown RBP eCLIP3.22□□□□□ -1.89
LPP-222ENST00000640853 NOP14P78316 857 aaKnown RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 ROR1Q01973 937 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 CACNB1Q02641 598 aaPredicted RBP3.22□□□□□ -1.89
LPP-222ENST00000640853 SLC27A3Q5K4L6 730 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 CENPPQ6IPU0 288 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 TRIM67Q6ZTA4 783 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 C11orf96Q7Z7L8 435 aa3.22□□□□□ -1.89
LPP-222ENST00000640853 ATP11CQ8NB49 1132 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms