RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 TPI1P60174 286 aa15.55■□□□□ 0.08
HNRNPU-226ENST00000640218 BAATQ14032 418 aaPredicted RBP15.55■□□□□ 0.08
HNRNPU-226ENST00000640218 THEMIS2Q5TEJ8 643 aa15.55■□□□□ 0.08
HNRNPU-226ENST00000640218 MRPL40Q9NQ50 206 aaKnown RBP15.55■□□□□ 0.08
HNRNPU-226ENST00000640218 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
HNRNPU-226ENST00000640218 ZNF543Q08ER8 600 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TAF1CQ15572 869 aaPredicted RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 DEFB132Q7Z7B7 95 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 MICALL2Q8IY33 904 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TRIM62Q9BVG3 475 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 EIF2AQ9BY44 585 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 DHX34Q14147 1143 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 CLEC10AQ8IUN9 316 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 PLEKHA5Q9HAU0 1116 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 FAM205CA6NFA0 338 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 POLRMTO00411 1230 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 RGS7P49802 495 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 EXOSC10Q01780 885 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 SEMA3FQ13275 785 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 HIF1AQ16665 826 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TRIM54Q9BYV2 358 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 WARS2Q9UGM6 360 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 HSD17B4P51659 736 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 PPP2R3CQ969Q6 453 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 C18orf8Q96DM3 657 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 MS4A14Q96JA4 679 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 CRB1P82279 1406 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 HUNKP57058 714 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 RAD51Q06609 339 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 ECT2Q9H8V3 914 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 RNF103-CHMP3A0A140T963 221 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 SESN2P58004 480 aaPredicted RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 KCNV2Q8TDN2 545 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 AGAP3Q96P47 875 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 EPAS1Q99814 870 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 PHF20Q9BVI0 1012 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 TRPC7Q9HCX4 862 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
HNRNPU-226ENST00000640218 ZNF185O15231 689 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 DYRK4Q9NR20 520 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 AIPL1Q9NZN9 384 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 CNOT7Q9UIV1 285 aaKnown RBP15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 SNX9Q9Y5X1 595 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 ATICP31939 592 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 ATP6V1G3Q96LB4 118 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 PPP1R36Q96LQ0 422 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 REEP2Q9BRK0 252 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 CLTCL1P53675 1640 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 NLRP14Q86W24 1093 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 APPL2Q8NEU8 664 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 DPF2Q92785 391 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 APEX2Q9UBZ4 518 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 SLC16A3O15427 465 aaKnown RBP15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 RFX8Q6ZV50 586 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 SPATA4Q8NEY3 305 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 SLC35G2Q8TBE7 412 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 ARL8AQ96BM9 186 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 NDUFB10O96000 172 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 SLC1A1P43005 524 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 ACTR2P61160 394 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 CCDC90BQ9GZT6 254 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 ZNRF3Q9ULT6 936 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
HNRNPU-226ENST00000640218 PRPF4O43172 522 aaKnown RBP eCLIP15.52■□□□□ 0.084e-7■■■■□ 21.3
HNRNPU-226ENST00000640218 MYO1DO94832 1006 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 KCNA2P16389 499 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 STRIP1Q5VSL9 837 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 TEX12Q9BXU0 123 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 ASPSCR1Q9BZE9 553 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 GOLGA8RI6L899 631 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 CTSHP09668 335 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 TERF2Q15554 542 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 CHP1Q99653 195 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 CCSER1Q9C0I3 900 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 ZDHHC9Q9Y397 364 aa15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
HNRNPU-226ENST00000640218 DGAT1O75907 488 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 RARBP10826 455 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 AP2B1P63010 937 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 TEDDM1Q5T9Z0 273 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 PPHLN1Q8NEY8 458 aaKnown RBP15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 ATL2Q8NHH9 583 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 IGDCC4Q8TDY8 1250 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 ZFATQ9P243 1243 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 SCAF8Q9UPN6 1271 aaKnown RBP15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 QRICH2Q9H0J4 1663 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 TMEM62Q0P6H9 643 aa15.52■□□□□ 0.07
HNRNPU-226ENST00000640218 NAA30Q147X3 362 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms