RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	CCAR2	Q8N163	923 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	FBXL13	Q8NEE6	735 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	EIF2A	Q9BY44	585 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	OSBPL7	Q9BZF2	842 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	RAB20	Q9NX57	234 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARHGAP20	Q9P2F6	1191 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	HES2	Q9Y543	173 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	SCN10A	Q9Y5Y9	1956 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	CDY2A	Q9Y6F7	541 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091		A0A0U1RQJ8	604 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MOXD2P	A6NHM9	499 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MEFV	O15553	781 aa	Predicted RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	CHRNA1	P02708	482 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MCF2	P10911	925 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	HNRNPH3	P31942	346 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	GTF2H1	P32780	548 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	THPO	P40225	353 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MRPS6	P82932	125 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	C15orf39	Q6ZRI6	1047 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	TMEM130	Q8N3G9	435 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	ATRIP	Q8WXE1	791 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	KAT5	Q92993	513 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	RNF208	Q9H0X6	261 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	RPF1	Q9H9Y2	349 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	PIN4	Q9Y237	131 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	NOD1	Q9Y239	953 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	COQ4	Q9Y3A0	265 aa		11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	NOC2L	Q9Y3T9	749 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091	MKI67	P46013	3256 aa	Known RBP	11.32	□□□□□ -0.6
NECAP1-223	ENST00000640091		A0A1W2PQ45	241 aa	Predicted RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091		A0A1W2PQY0	241 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	PMM2	O15305	246 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	CABYR	O75952	493 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	NPTXR	O95502	500 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	CST3	P01034	146 aa	Predicted RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	TFAM	Q00059	246 aa	Known RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	NFX1	Q12986	1120 aa	Known RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	DRAP1	Q14919	205 aa	Predicted RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZACN	Q401N2	412 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	HGSNAT	Q68CP4	663 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	RSPH3	Q86UC2	560 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	SESTD1	Q86VW0	696 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	PPM1K	Q8N3J5	372 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARRDC4	Q8NCT1	418 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	ACRBP	Q8NEB7	543 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	TATDN2	Q93075	761 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	CGRRF1	Q99675	332 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	ADPGK	Q9BRR6	497 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	TRPV6	Q9H1D0	765 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	CXCL16	Q9H2A7	254 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	STARD7	Q9NQZ5	370 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	RNF19A	Q9NV58	838 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	PPP2R2C	Q9Y2T4	447 aa		11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.31	□□□□□ -0.6
NECAP1-223	ENST00000640091	LACTBL1	A8MY62	500 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091		M0QZ92	97 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	NDUFA10	O95299	355 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	VNN1	O95497	513 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	CLTA	P09496	248 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	JAM2	P57087	298 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	SLC10A6	Q3KNW5	377 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	SPOPL	Q6IQ16	392 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	NOTUM	Q6P988	496 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	IRF2BP2	Q7Z5L9	587 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	EFCAB13	Q8IY85	973 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	CCDC42	Q96M95	316 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	TSEN34	Q9BSV6	310 aa	Known RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	STK33	Q9BYT3	514 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	MTMR12	Q9C0I1	747 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	GPR88	Q9GZN0	384 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	SPTLC3	Q9NUV7	552 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	SNTG2	Q9NY99	539 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	AIPL1	Q9NZN9	384 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	FBXL5	Q9UKA1	691 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	ADGRG1	Q9Y653	693 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	FOXN3	O00409	490 aa	Predicted RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	PHACTR2	O75167	634 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	GFPT2	O94808	682 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	CLSTN1	O94985	981 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	HLA-DRA	P01903	254 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	CCL5	P13501	91 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	EIF4A3	P38919	411 aa	Known RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	CYP27A1	Q02318	531 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	ENPEP	Q07075	957 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	TDRD12	Q587J7	1177 aa	Known RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	SLC27A1	Q6PCB7	646 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	FAM228A	Q86W67	206 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	PPP1R13B	Q96KQ4	1090 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	C16orf45	Q96MC5	204 aa	Predicted RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	ACAP3	Q96P50	834 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	NUCKS1	Q9H1E3	243 aa	Known RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	PAK6	Q9NQU5	681 aa	Predicted RBP	11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	TFR2	Q9UP52	801 aa		11.3	□□□□□ -0.6
NECAP1-223	ENST00000640091	KBTBD13	C9JR72	458 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091		F8VZ95	297 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	B4GALT4	O60513	344 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	RPS6KA5	O75582	802 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	AKAP5	P24588	427 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	PIK3CA	P42336	1068 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms