RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 FAM102AQ5T9C2 384 aaPredicted RBP6.59□□□□□ -1.35
CCDC7-216ENST00000640058 MED25Q71SY5 747 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 CNTD1Q8N815 330 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
CCDC7-216ENST00000640058 HOXB13Q92826 284 aaPredicted RBP6.59□□□□□ -1.35
CCDC7-216ENST00000640058 MRI1Q9BV20 369 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 AJAP1Q9UKB5 411 aaPredicted RBP6.59□□□□□ -1.35
CCDC7-216ENST00000640058 PNPLA7Q6ZV29 1317 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 PPFIA4O75335 1185 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 ATP5JP18859 108 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 INHBEP58166 350 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 KLF1Q13351 362 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-216ENST00000640058 SMN1Q16637 294 aaKnown RBP6.58□□□□□ -1.36
CCDC7-216ENST00000640058 BEAN1Q3B7T3 259 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 METRNLQ641Q3 311 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 AMOTL1Q8IY63 956 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 OR2I1PQ8NGU4 316 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 GPR150Q8NGU9 434 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 CCHCR1Q8TD31 782 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 DPF2Q92785 391 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 WDR11Q9BZH6 1224 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 SPC25Q9HBM1 224 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 MOCS1Q9NZB8 636 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
CCDC7-216ENST00000640058 SIK3Q9Y2K2 1263 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 ACTL7AQ9Y615 435 aa6.58□□□□□ -1.36
CCDC7-216ENST00000640058 PHLDB1Q86UU1 1377 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 GRID2IPA4D2P6 1211 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 TMEM200CA6NKL6 621 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 ENDOD1O94919 500 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 MT-CO1P00395 513 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 AGXTP21549 392 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
CCDC7-216ENST00000640058 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 RRP12Q5JTH9 1297 aaKnown RBP6.57□□□□□ -1.36
CCDC7-216ENST00000640058 BEND2Q8NDZ0 799 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 OR56A1Q8NGH5 318 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 MYOCQ99972 504 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 CYP4F11Q9HBI6 524 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 TMEM140Q9NV12 185 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 SLC5A4Q9NY91 659 aa6.57□□□□□ -1.36
CCDC7-216ENST00000640058 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 GAGE12HA6NDE8 117 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 B3GALT2O43825 422 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 GCP02774 474 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 IL2RBP14784 551 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 SLC6A2P23975 617 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 PCSK1P29120 753 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 GUCY1A2P33402 732 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 ZEB1P37275 1124 aaPredicted RBP6.56□□□□□ -1.36
CCDC7-216ENST00000640058 SLC6A9P48067 706 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 MGAT2Q10469 447 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 TP53BP2Q13625 1128 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 HECTD2Q5U5R9 776 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 ZNF529Q6P280 563 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 CMTR2Q8IYT2 770 aaKnown RBP6.56□□□□□ -1.36
CCDC7-216ENST00000640058 NRG4Q8WWG1 115 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 RAB24Q969Q5 203 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 ADAM2Q99965 735 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 ZSWIM1Q9BR11 485 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 SERHL2Q9H4I8 314 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 ATP11BQ9Y2G3 1177 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 FPGT-TNNI3KV9GXZ4 949 aa6.56□□□□□ -1.36
CCDC7-216ENST00000640058 K7ESF4 209 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 PROZP22891 400 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 DDX6P26196 483 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC7-216ENST00000640058 GUCY1B3Q02153 619 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 RESTQ13127 1097 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 ACAP2Q15057 778 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
CCDC7-216ENST00000640058 AGAP9Q5VTM2 703 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 PGM2L1Q6PCE3 622 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 ARHGEF19Q8IW93 802 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 DRC7Q8IY82 874 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 LCORLQ8N3X6 602 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 ZG16BQ96DA0 208 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 KLHL11Q9NVR0 708 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 FBXO34Q9NWN3 711 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 ATP8A1Q9Y2Q0 1164 aa6.55□□□□□ -1.36
CCDC7-216ENST00000640058 GPR32O75388 356 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 POMCP01189 267 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 COL10A1Q03692 680 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 RNF187Q5TA31 235 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-216ENST00000640058 Q6YL49 198 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 RHOT2Q8IXI1 618 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 ZGPATQ8N5A5 531 aaKnown RBP6.54□□□□□ -1.36
CCDC7-216ENST00000640058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC7-216ENST00000640058 FUBP3Q96I24 572 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC7-216ENST00000640058 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-216ENST00000640058 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 INTUQ9ULD6 942 aa6.54□□□□□ -1.36
CCDC7-216ENST00000640058 FAM171A2A8MVW0 826 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 PRSS23O95084 383 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 SPDEFO95238 335 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms