RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MIF4GDA9UHW6 222 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 DDX39AO00148 427 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GYG2O15488 501 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TSPAN9O75954 239 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TJP3O95049 919 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NR3C1P04150 777 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ERVK-24P63145 666 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 BASP1P80723 227 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MRPS9P82933 396 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 CDR2Q01850 454 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ZNF543Q08ER8 600 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 BYSLQ13895 437 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SLC18A3Q16572 532 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PTPROQ16827 1216 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FYB2Q5VWT5 728 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TTI2Q6NXR4 508 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 RASSF3Q86WH2 238 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ADGRF4Q8IZF3 695 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 DQX1Q8TE96 717 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PTPRN2Q92932 1015 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ZNF577Q9BSK1 485 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 BHMT2Q9H2M3 363 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 XAB2Q9HCS7 855 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PPP1R1BQ9UD71 204 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MAD2L2Q9UI95 211 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 RBMX2Q9Y388 322 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 LMO7Q8WWI1 1683 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MYMKA6NI61 221 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 E9PMD0 336 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 KCNQ2O43526 872 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NOL3O60936 208 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MYCLP12524 364 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 RFX1P22670 979 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MARK3P27448 753 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ARL1P40616 181 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TUBP50607 506 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 STAT2P52630 851 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 HDAC4P56524 1084 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GFPT1Q06210 699 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 C16orf72Q14CZ0 275 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 LIN52Q52LA3 116 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 C6orf118Q5T5N4 469 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 DAB2IPQ5VWQ8 1189 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FAM160B2Q86V87 743 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SP8Q8IXZ3 490 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 LARGE2Q8N3Y3 721 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 STKLD1Q8NE28 680 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ERP27Q96DN0 273 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MS4A14Q96JA4 679 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 CRAMP1Q96RY5 1269 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 COQ7Q99807 217 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FHDC1Q9C0D6 1143 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 IL1RAPL1Q9NZN1 696 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TRIM17Q9Y577 477 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FLT1P17948 1338 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ZSCAN5CA6NGD5 496 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 USP17L10C9JJH3 530 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 BOLA2-SMG1P6H3BVE0 249 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MGEA5O60502 916 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GMNNO75496 209 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GLI1P08151 1106 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 HSPA8P11142 646 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GJC1P36383 396 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NOP14P78316 857 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PHEXP78562 749 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 GPSM2P81274 684 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 AMPD2Q01433 879 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ITIH3Q06033 890 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NFIXQ14938 502 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 LRRC36Q1X8D7 754 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 C14orf80Q86SX3 495 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SAMD3Q8N6K7 520 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SPATA20Q8TB22 786 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 DNAJC1Q96KC8 554 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 Q9H521 79 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SLITRK6Q9H5Y7 841 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 AZI2Q9H6S1 392 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 AASDHPPTQ9NRN7 309 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SELENONQ9NZV5 590 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 HAO1Q9UJM8 370 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TRPC5Q9UL62 973 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PITPNM2Q9BZ72 1349 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 PDLIM1O00151 329 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 MEIS1O00470 390 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 PODXLO00592 558 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 RASGRF2O14827 1237 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CLIC2O15247 247 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SART1O43290 800 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 TARSP26639 723 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 RGS2P41220 211 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 TNFAIP1Q13829 316 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 ZYXQ15942 572 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 QRICH1Q2TAL8 776 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 XKR9Q5GH70 373 aa6.01□□□□□ -1.45
SCARB2-218ENST00000639715 CCSAPQ6IQ19 270 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 MARK2Q7KZI7 788 aaKnown RBP6.01□□□□□ -1.45
SCARB2-218ENST00000639715 SFR1Q86XK3 245 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms