RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 KRTAP10-8P60410 259 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 HSD11B2P80365 405 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 SF3B3Q15393 1217 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 TRIP6Q15654 476 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 NPY5RQ15761 445 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 LEXMQ3ZCV2 418 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 OTUD3Q5T2D3 398 aaPredicted RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 KIAA0895LQ68EN5 471 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 MRPL10Q7Z7H8 261 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 PRSS3P2Q8NHM4 247 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 FERMT2Q96AC1 680 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 NACC2Q96BF6 587 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 FBXL20Q96IG2 436 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 CAMKK2Q96RR4 588 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 NOL10Q9BSC4 688 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 RNPEPQ9H4A4 650 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 MTG2Q9H4K7 406 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 SERGEFQ9UGK8 458 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 KCNE5Q9UJ90 142 aa1.71□□□□□ -2.14
LMBR1-222ENST00000638959 DDX41Q9UJV9 622 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 MTO1Q9Y2Z2 717 aaKnown RBP1.71□□□□□ -2.14
LMBR1-222ENST00000638959 TRGV11A0A075B6L2 103 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 C4orf47A7E2U8 309 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 ERI2A8K979 691 aaKnown RBP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 GCOM1H8Y6P7 765 aaPredicted RBP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 SMAD7O15105 426 aaKnown RBP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 TUBB4AP04350 444 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 NAT1P18440 290 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 FNTBP49356 437 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 FANCCQ00597 558 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 IRF9Q00978 393 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 CD69Q07108 199 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 SF3B4Q15427 424 aaKnown RBP eCLIP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 CYP2A13Q16696 494 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 NBPF8Q3BBV2 869 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 Q4G0T1 1027 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 HIST2H2BCQ6DN03 193 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 FOXR2Q6PJQ5 311 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 SND1Q7KZF4 910 aaKnown RBP eCLIP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 ZNF329Q86UD4 541 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 HIST1H2AHQ96KK5 128 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 LMLNQ96KR4 655 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 CDC5LQ99459 802 aaKnown RBP1.7□□□□□ -2.14
LMBR1-222ENST00000638959 HIST1H2AJQ99878 128 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 SOX7Q9BT81 388 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 ARHGEF4Q9NR80 690 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 STRIP2Q9ULQ0 834 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 MMP24Q9Y5R2 645 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 AATKQ6ZMQ8 1374 aa1.7□□□□□ -2.14
LMBR1-222ENST00000638959 A0A0A6YYJ9 748 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 SMIM35A0A1B0GVV1 85 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 TNFRSF13BO14836 293 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 LINC01565O15544 149 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 BRINP1O60477 761 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 OPHN1O60890 802 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 ERN1O75460 977 aaKnown RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 EYA4O95677 639 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 HOXA4Q00056 320 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 MYBPC3Q14896 1274 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 FXNQ16595 210 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 GEN1Q17RS7 908 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 ATXN7L2Q5T6C5 722 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 YOD1Q5VVQ6 348 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 CC2D1AQ6P1N0 951 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 SHC4Q6S5L8 630 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 MED25Q71SY5 747 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 NR2C2APQ86WQ0 139 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 ZNF654Q8IZM8 581 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 FUBP3Q96I24 572 aaKnown RBP eCLIP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 VCPIP1Q96JH7 1222 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 PITHD1Q9GZP4 211 aaPredicted RBP1.69□□□□□ -2.14
LMBR1-222ENST00000638959 USP25Q9UHP3 1055 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 PCDHA9Q9Y5H5 950 aa1.69□□□□□ -2.14
LMBR1-222ENST00000638959 TRAV20A0A0B4J274 112 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 TARM1B6A8C7 271 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 EFCAB14O75071 495 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 APOL3O95236 402 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 GJB6O95452 261 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 LY86O95711 162 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 FGBP02675 491 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 HNRNPCP07910 306 aaKnown RBP eCLIP1.68□□□□□ -2.14
LMBR1-222ENST00000638959 TMEM191BP0C7N4 346 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 CDKN2AP42771 156 aaKnown RBP1.68□□□□□ -2.14
LMBR1-222ENST00000638959 ADCY2Q08462 1091 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 TWIST1Q15672 202 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 PROSER3Q2NL68 480 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 KRTAP13-3Q3SY46 172 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 TNNI3KQ59H18 835 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 PTPRN2Q92932 1015 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 SGSM3Q96HU1 749 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 TRIM55Q9BYV6 548 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 COQ6Q9Y2Z9 468 aa1.68□□□□□ -2.14
LMBR1-222ENST00000638959 CYP2D7A0A087X1C5 515 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 CCDC78A2IDD5 438 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 LACTBL1A8MY62 500 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 ADM5C9JUS6 153 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 H3BNX3 289 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 SMIM22K7EJ46 135 aa1.67□□□□□ -2.14
LMBR1-222ENST00000638959 TBC1D4O60343 1298 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms